RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 VDRP11473 427 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
VPREB3-202ENST00000398465 EEF1GP26641 437 aaKnown RBP13.48□□□□□ -0.25
VPREB3-202ENST00000398465 CTHP32929 405 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 PSEN1P49768 467 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ZNF132P52740 706 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
VPREB3-202ENST00000398465 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 STILQ15468 1287 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 STX1AQ16623 288 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 GOLGA7BQ2TAP0 167 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 HECTD3Q5T447 861 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ANKRD52Q8NB46 1076 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 DTWD2Q8NBA8 298 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 OSCP1Q8WVF1 389 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ATP2A3Q93084 1043 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 ZFYVE19Q96K21 471 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 HESX1Q9UBX0 185 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
VPREB3-202ENST00000398465 SPECC1L-ADORA2AF8WAN1 911 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
VPREB3-202ENST00000398465 PI15O43692 258 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CD19P15391 556 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 PLA2G5P39877 138 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
VPREB3-202ENST00000398465 KPNA1P52294 538 aaPredicted RBP13.47□□□□□ -0.25
VPREB3-202ENST00000398465 KIF11P52732 1056 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 TCF15Q12870 199 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 MEA1Q16626 185 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CPA6Q8N4T0 437 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
VPREB3-202ENST00000398465 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
VPREB3-202ENST00000398465 FAM3CQ92520 227 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 KAT5Q92993 513 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CLDN23Q96B33 292 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 KREMEN1Q96MU8 473 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 HPS4Q9NQG7 708 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 GTSE1Q9NYZ3 720 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 APEX2Q9UBZ4 518 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CNTN6Q9UQ52 1028 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 CPQQ9Y646 472 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
VPREB3-202ENST00000398465 FAM170BA6NMN3 283 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 LEFTY2O00292 366 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 CYP26A1O43174 497 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 COCHO43405 550 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 TLR5O60602 858 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 ABL1P00519 1130 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 IFNAR2P48551 515 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 AMPD2Q01433 879 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 TNK2Q07912 1038 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 RUNX3Q13761 415 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 EXOC3L4Q17RC7 722 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 PIGZQ86VD9 579 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 CDK5RAP1Q96SZ6 601 aaKnown RBP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 NDST4Q9H3R1 872 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 GKN1Q9NS71 199 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 DUS2Q9NX74 493 aaKnown RBP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
VPREB3-202ENST00000398465 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPREB3-202ENST00000398465 NFATC1O95644 943 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 DCNP07585 359 aaKnown RBP13.45□□□□□ -0.26
VPREB3-202ENST00000398465 CD72P21854 359 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 MFAP3P55082 362 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 ZXDBP98169 803 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 NHLH1Q02575 133 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 PDE4CQ08493 712 aa13.45□□□□□ -0.26
VPREB3-202ENST00000398465 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms