RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NKIRAS1Q9NYS0 192 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 AJAP1Q9UKB5 411 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CORO1CQ9ULV4 474 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 THSD7BQ9C0I4 1608 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 TTI1O43156 1089 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PDGFRAP16234 1089 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PSMA2P25787 234 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ADSLP30566 484 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 MDH1P40925 334 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 RAB41Q5JT25 222 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 GLB1LQ6UWU2 654 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 DCP1BQ8IZD4 617 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 OVCA2Q8WZ82 227 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 WNT8BQ93098 351 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 POP5Q969H6 163 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ZWILCHQ9H900 591 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ERVK-5Q9HDB9 667 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 MICAL3Q7RTP6 2002 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 LACTBL1A8MY62 500 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SYF2O95926 243 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 EZRP15311 586 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SLC24A5Q71RS6 500 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ANKLE1Q8NAG6 615 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 KIF12Q96FN5 646 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CAPZA3Q96KX2 299 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SLC2A13Q96QE2 648 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 DHRS4Q9BTZ2 278 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 IL37Q9NZH6 218 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 USP3Q9Y6I4 520 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 DAPK3O43293 454 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CXCL8P10145 99 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC130P13994 396 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 C8orf48Q96LL4 319 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ARNT2Q9HBZ2 717 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 TSPAN16Q9UKR8 245 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 LRRD1A4D1F6 860 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 TGDSO95455 350 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 APOA4P06727 396 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 FAM200BP0CF97 657 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 KLRC2P26717 231 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 RFC1P35251 1148 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ARSEP51690 589 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 BFSP2Q13515 415 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 NAA30Q147X3 362 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 HIF1AQ16665 826 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 LY6KQ17RY6 165 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC50Q8IVM0 306 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 MYCBPAPQ8TBZ2 947 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SMARCD1Q96GM5 515 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SNX25Q9H3E2 840 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 MINDY3Q9H8M7 445 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 IGSF9Q9P2J2 1179 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 FNDC1Q4ZHG4 1894 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 H3BRJ5 948 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CELF2O95319 508 aaKnown RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 PGK2P07205 417 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GHRP10912 638 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 MATR3P43243 847 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 C7orf31Q8N865 590 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 PDZD8Q8NEN9 1154 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 RBM15Q96T37 977 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 DMAP1Q9NPF5 467 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ODC1P11926 461 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 LSP1P33241 339 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 MNAT1P51948 309 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ITIH4Q14624 930 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM132AQ24JP5 1023 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GNASQ5JWF2 1037 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 DCLRE1AQ6PJP8 1040 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 LINC00523Q86TU6 105 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 SUSD3Q96L08 255 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ZIM3Q96PE6 472 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 EPAS1Q99814 870 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 KIFC3Q9BVG8 833 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA6L7A0A1B0GV03 622 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 DYTNA2CJ06 578 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CPP00450 1065 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 STX2P32856 288 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 SERPINB5P36952 375 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 MAGEA3P43357 314 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CDK7P50613 346 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 DCAF12L1Q5VU92 463 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ARHGEF2Q92974 986 aaKnown RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 C1orf74Q96LT6 269 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8IPA6NC78 632 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ZSCAN5CA6NGD5 496 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8JA6NMD2 632 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 WASH4PA8MWX3 477 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CSDE1O75534 798 aaKnown RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 RALAP11233 206 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 RASSF2P50749 326 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 SEMA5AQ13591 1074 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 PAFAH1B3Q15102 231 aaKnown RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 SLC45A4Q5BKX6 768 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 POPDC2Q9HBU9 364 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms