RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CNOT8Q9UFF9 292 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CCDC66A2RUB6 948 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 ZSCAN5CA6NGD5 496 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SART1O43290 800 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 LILRB3O75022 631 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 FGGP02679 453 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 ADORA2BP29275 332 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SSTR3P32745 418 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 OR1D2P34982 312 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 GUCY2DQ02846 1103 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 GOLGA7BQ2TAP0 167 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 LCLAT1Q6UWP7 414 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 C4orf50Q6ZRC1 276 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PHF13Q86YI8 300 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SPATA2LQ8IUW3 424 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 KRT35Q92764 455 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PCED1BQ96HM7 432 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 B3GNT5Q9BYG0 378 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 RXFP1Q9HBX9 757 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 EPB41L5Q9HCM4 733 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 TMLHEQ9NVH6 421 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 TSPAN16Q9UKR8 245 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PCDHGC3Q9UN70 934 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 COL4A4P53420 1690 aaPredicted RBP15.67■□□□□ 0.1
CAPN3-207ENST00000397200 M0QYV0 167 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 FSCN2O14926 492 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 ADAM12O43184 909 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 MICAL2O94851 1124 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 MARCKSL1P49006 195 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CARSP49589 748 aaKnown RBP15.67■□□□□ 0.1
CAPN3-207ENST00000397200 NDUFV1P49821 464 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CDR1P51861 262 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 ROR1Q01973 937 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 GPR17Q13304 367 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CUL1Q13616 776 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 MESDQ14696 234 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 PDE12Q6L8Q7 609 aaKnown RBP15.67■□□□□ 0.1
CAPN3-207ENST00000397200 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
CAPN3-207ENST00000397200 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 AP1M1Q9BXS5 423 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 EMILIN2Q9BXX0 1053 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 LMAN2LQ9H0V9 348 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CEP83Q9Y592 693 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 PCDHA3Q9Y5H8 950 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 IRAK3Q9Y616 596 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CHD9Q3L8U1 2897 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 PTPRDP23468 1912 aa15.67■□□□□ 0.1
CAPN3-207ENST00000397200 CLDN5O00501 218 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 SYF2O95926 243 aaKnown RBP15.66■□□□□ 0.1
CAPN3-207ENST00000397200 ECHS1P30084 290 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 PTP4A2Q12974 167 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 CAMK1Q14012 370 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 FAM35AQ86V20 835 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 PASD1Q8IV76 773 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 MRPL43Q8N983 215 aaKnown RBP15.66■□□□□ 0.1
CAPN3-207ENST00000397200 PGLYRP2Q96PD5 576 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 DDX47Q9H0S4 455 aaKnown RBP15.66■□□□□ 0.1
CAPN3-207ENST00000397200 ZNF576Q9H609 170 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 ABI2Q9NYB9 513 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-207ENST00000397200 PCDHB5Q9Y5E4 795 aa15.66■□□□□ 0.1
CAPN3-207ENST00000397200 WDR27A2RRH5 827 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 C2orf71A6NGG8 1288 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 EPOPA6NHQ4 379 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 AGPSO00116 658 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 TEX28O15482 410 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ADH1AP07327 375 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CFHP08603 1231 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CNPP09543 421 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 NSFP46459 744 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 BCAT1P54687 386 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 SLC8A3P57103 927 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 DMTNQ08495 405 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 RAB33AQ14088 237 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 NAA35Q5VZE5 725 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 DENND1BQ6P3S1 775 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 RNF19BQ6ZMZ0 732 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 PAQR9Q6ZVX9 377 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 MAATS1Q7Z4T9 603 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ANKRD52Q8NB46 1076 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CCDC26Q8TAB7 109 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 SMARCD1Q96GM5 515 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 FUBP3Q96I24 572 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ZNF518BQ9C0D4 1074 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 KRT82Q9NSB4 513 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 LAMA3Q16787 3333 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ESYT3A0FGR9 886 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 FAM170AA1A519 330 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 HIDE1A8MVS5 230 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 AP1G2O75843 785 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 LSM8O95777 96 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms