RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 HAPLN3Q96S86 360 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 MRIQ9BWK5 157 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 MYOCOSA0A1B0GUC4 107 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 KBTBD13C9JR72 458 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 E7ESA3 106 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 ENTPD3O75355 529 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 TM7SF2O76062 418 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 CCNE2O96020 404 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 PENKP01210 267 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 JAK3P52333 1124 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 HPCAP84074 193 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 MAP7Q14244 749 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 DNAL1Q4LDG9 190 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF394Q53GI3 561 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 STRIP1Q5VSL9 837 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 IGDCC3Q8IVU1 814 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 SAMD3Q8N6K7 520 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 HIPK4Q8NE63 616 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 HSPBAP1Q96EW2 488 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 NTPCRQ9BSD7 190 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 DDX43Q9NXZ2 648 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 SLC7A8Q9UHI5 535 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 TAGLN3Q9UI15 199 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 PPM1HQ9ULR3 514 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 NUB1Q9Y5A7 615 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 PTPRJQ12913 1337 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TRIM49D1C9J1S8 452 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF862O60290 1169 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PSMA2P25787 234 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ACTR3P61158 418 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SLC18A2Q05940 514 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 BST1Q10588 318 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 DACT2Q5SW24 774 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CYP4A22Q5TCH4 519 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 LPCAT4Q643R3 524 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CDHR3Q6ZTQ4 885 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 UNC45BQ8IWX7 931 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PPM1NQ8N819 430 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CFAP36Q96G28 342 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PRMT6Q96LA8 375 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SLC13A1Q9BZW2 595 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 MAF1Q9H063 256 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 WWP1Q9H0M0 922 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SERPINA10Q9UK55 444 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 FEM1BQ9UK73 627 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 AGO2Q9UKV8 859 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 HEMK1Q9Y5R4 338 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SIPA1L1O43166 1804 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ARHGAP42A6NI28 874 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 FAM155BO75949 473 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 WEE2P0C1S8 567 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TBXAS1P24557 533 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PTPN7P35236 360 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 NRLP54845 237 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 AQP5P55064 265 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SP4Q02446 784 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CHI3L2Q15782 390 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 FAM91A1Q658Y4 838 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ATG16L1Q676U5 607 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CC2D2BQ6DHV5 1058 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PAOXQ6QHF9 649 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RASSF3Q86WH2 238 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RNF168Q8IYW5 571 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 NCSTNQ92542 709 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PPP2R3CQ969Q6 453 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 E2F7Q96AV8 911 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF395Q9H8N7 513 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 C17orf75Q9HAS0 396 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RBAKQ9NYW8 714 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 GABBR1Q9UBS5 961 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RBBP6Q7Z6E9 1792 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CAPN14A8MX76 684 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ICAM1P05362 532 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 ATP6V1B1P15313 513 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SFNP31947 248 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 EIF3EP60228 445 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 KRT76Q01546 638 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RBM44Q6ZP01 1051 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 RFX6Q8HWS3 928 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CRLF3Q8IUI8 442 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TMEM35BQ8NCS4 154 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 PRPF31Q8WWY3 499 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 TAAR1Q96RJ0 339 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 IMPG2Q9BZV3 1241 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 SLC9A2Q9UBY0 812 aa9.54□□□□□ -0.88
CAPN3-206ENST00000397163 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
CAPN3-206ENST00000397163 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 MEI4A8MW99 385 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms