RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PRMT8Q9NR22 394 aaPredicted RBP14.75□□□□□ -0.05
SEC13-204ENST00000397099 CISHQ9NSE2 258 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 TBC1D14Q9P2M4 693 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 KIAA1257Q9ULG3 409 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 PCDHGA2Q9Y5H1 932 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 TRDMT1O14717 391 aaKnown RBP14.74□□□□□ -0.05
SEC13-204ENST00000397099 ATG13O75143 517 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 ABL1P00519 1130 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 ZDHHC11BP0C7U3 371 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 CCDC130P13994 396 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 DRD1P21728 446 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 FMO5P49326 533 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 CACNA2D1P54289 1103 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 MAP3K7CLP57077 242 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 FBXO43Q4G163 708 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 CBWD6Q4V339 395 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 CBWD3Q5JTY5 395 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 CBWD5Q5RIA9 395 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 ISM2Q6H9L7 571 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 C12orf29Q8N999 325 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 MLKLQ8NB16 471 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 SEMA4DQ92854 862 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 OTUB2Q96DC9 234 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 TMEM176AQ96HP8 235 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 SMOQ99835 787 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 DUSP16Q9BY84 665 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 EBF3Q9H4W6 596 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 HPS4Q9NQG7 708 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 TMEM30AQ9NV96 361 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 HMGXB4Q9UGU5 601 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 SCML2Q9UQR0 700 aa14.74□□□□□ -0.05
SEC13-204ENST00000397099 RIF1Q5UIP0 2472 aaKnown RBP14.74□□□□□ -0.05
SEC13-204ENST00000397099 E2F8A0AVK6 867 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 LEFTY2O00292 366 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 PAPSS2O95340 614 aaPredicted RBP14.73□□□□□ -0.05
SEC13-204ENST00000397099 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
SEC13-204ENST00000397099 BMP6P22004 513 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 SOX9P48436 509 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 TNK2Q07912 1038 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 GOLGA8FQ08AF8 430 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 GOLGA8DPQ0D2H9 430 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
SEC13-204ENST00000397099 CUL2Q13617 745 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 CCINQ13939 588 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 PREPLQ4J6C6 727 aaPredicted RBP14.73□□□□□ -0.05
SEC13-204ENST00000397099 CLEC20AQ6ZU45 233 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 ZNF276Q8N554 614 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 SCAMP5Q8TAC9 235 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 WHAMMQ8TF30 809 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 JAKMIP2Q96AA8 810 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 FAM81BQ96LP2 452 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 HEXIM2Q96MH2 286 aaKnown RBP14.73□□□□□ -0.05
SEC13-204ENST00000397099 SLC22A12Q96S37 553 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 NACA2Q9H009 215 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 ECT2Q9H8V3 914 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 ZSCAN32Q9NX65 697 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 RWDD2AQ9UIY3 292 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 CTNND2Q9UQB3 1225 aa14.73□□□□□ -0.05
SEC13-204ENST00000397099 MYO16Q9Y6X6 1858 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 BIN1O00499 593 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 MBL2P11226 248 aaPredicted RBP14.72□□□□□ -0.05
SEC13-204ENST00000397099 ADORA2BP29275 332 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 CXCL12P48061 93 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 EML3Q32P44 896 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 TMEM196Q5HYL7 178 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 ARHGAP17Q68EM7 881 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 KLHDC10Q6PID8 442 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 KIAA2013Q8IYS2 634 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 ARHGAP18Q8N392 663 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 ZMIZ2Q8NF64 920 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 RUBCNQ92622 972 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 NT5C1BQ96P26 610 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 TWNKQ96RR1 684 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.72□□□□□ -0.053e-6■■■■■ 52.1
SEC13-204ENST00000397099 NCDNQ9UBB6 729 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 DACH1Q9UI36 760 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEC13-204ENST00000397099 CPQQ9Y646 472 aa14.72□□□□□ -0.05
SEC13-204ENST00000397099 AFPP02771 609 aaKnown RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 HOXA6P31267 233 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 GJA4P35212 333 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 EIF2DP41214 584 aaKnown RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 RAD23BP54727 409 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 GCNT1Q02742 428 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 ORC1Q13415 861 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 PON2Q15165 354 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 STILQ15468 1287 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 PPP1R26Q5T8A7 1209 aaPredicted RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 TRIM68Q6AZZ1 485 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 TXNDC11Q6PKC3 985 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 TRIM59Q8IWR1 403 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 ANKRD52Q8NB46 1076 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 SLC4A11Q8NBS3 891 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 ZBTB44Q8NCP5 570 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 TTC16Q8NEE8 873 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 NELL1Q92832 810 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 TATDN2Q93075 761 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms