RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 KRT73Q86Y46 540 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PGBD3Q8N328 593 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 TMEM120AQ9BXJ8 343 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PMPCBO75439 489 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PSMB9P28065 219 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 CCNG1P51959 295 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 AQP5P55064 265 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 NME5P56597 212 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 EPHX4Q8IUS5 362 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PHF20Q9BVI0 1012 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 SF3B1O75533 1304 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL4A3-202ENST00000396578 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 RARBP10826 455 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 TSGA10IPQ3SY00 556 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FAM98BQ52LJ0 330 aaKnown RBP14.43□□□□□ -0.1
COL4A3-202ENST00000396578 CD209Q9NNX6 404 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ENOPH1Q9UHY7 261 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PADI4Q9UM07 663 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FAM220BPB1ANY3 271 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 HLA-DRAP01903 254 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FAM200BP0CF97 657 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ATP6V1C1P21283 382 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ARHGAP22Q7Z5H3 698 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 LDHDQ86WU2 507 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MOSPD2Q8NHP6 518 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 RMND5BQ96G75 393 aaPredicted RBP14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PPP1R10Q96QC0 940 aaKnown RBP14.43□□□□□ -0.1
COL4A3-202ENST00000396578 WDCPQ9H6R7 721 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 TMBIM4Q9HC24 238 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MAN1C1Q9NR34 630 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NCF1BA6NI72 391 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NCF1CA8MVU1 366 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NCF1P14598 390 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SPP2Q13103 211 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NAIF1Q69YI7 327 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 DENND5BQ6ZUT9 1274 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 APOL4Q9BPW4 351 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 MYMKA6NI61 221 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 PTPN4P29074 926 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF57Q68EA5 555 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 WDR93Q6P2C0 686 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SLC13A5Q86YT5 568 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 ZCCHC7Q8N3Z6 543 aaKnown RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 BLOC1S5Q8TDH9 187 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 HPDLQ96IR7 371 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NAT9Q9BTE0 207 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 PHACTR1Q9C0D0 580 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 NMRK2Q9NPI5 230 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SRP68Q9UHB9 627 aaKnown RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 IPPQ9Y573 584 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 DYRK3O43781 588 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 MUTP22033 750 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 TMEM26Q6ZUK4 368 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 APBB2Q92870 758 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 MCRS1Q96EZ8 462 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 OSBPL6Q9BZF3 934 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 UBXN6Q9BZV1 441 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 CAMK2GQ13555 558 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 CROCCP3Q8IVE0 287 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SGF29Q96ES7 293 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 ROGDIQ9GZN7 287 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 ARIH1Q9Y4X5 557 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 MEI4A8MW99 385 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 CACNA2D1P54289 1103 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 HLFQ16534 295 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 SLC22A9Q8IVM8 553 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 PPP2R3CQ969Q6 453 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 VMP1Q96GC9 406 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 COPS7BQ9H9Q2 264 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 UBA2Q9UBT2 640 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 HPGDP15428 266 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 PAIP1Q9H074 479 aaKnown RBP14.42□□□□□ -0.1
COL4A3-202ENST00000396578 BTBD7Q9P203 1132 aa14.42□□□□□ -0.1
COL4A3-202ENST00000396578 F8VZ95 297 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 C21orf59P57076 290 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 POLD3Q15054 466 aaPredicted RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ATF7IP2Q5U623 682 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 IER5Q5VY09 327 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF438Q7Z4V0 828 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 UBA3Q8TBC4 463 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 VAV3Q9UKW4 847 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 SPATA31E1Q6ZUB1 1445 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TBKBP1A7MCY6 615 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MAGEB2O15479 319 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 C21orf2O43822 256 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TXNP10599 105 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MYL12AP19105 171 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 RFC5P40937 340 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 RXRGP48443 463 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ITGA1P56199 1179 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MAPK11Q15759 364 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 C1orf131Q8NDD1 294 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ATP6V1HQ9UI12 483 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TBX3O15119 743 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 SLC2A3P11169 496 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms