RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TRUB2O95900 331 aaKnown RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 GLI1P08151 1106 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 PDGFRAP16234 1089 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 EFHC1Q5JVL4 640 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 KCNT2Q6UVM3 1135 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 GPR161Q8N6U8 529 aaKnown RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 DAB1O75553 588 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 CYP2F1P24903 491 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 MAGEA11P43364 429 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 ALDH7A1P49419 539 aaKnown RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 FPGSQ05932 587 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 CLUL1Q15846 466 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 CTXN3Q4LDR2 81 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 TEX35Q5T0J7 233 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 C4orf50Q6ZRC1 276 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 DCP1BQ8IZD4 617 aaKnown RBP13.33□□□□□ -0.28
TRIM39-204ENST00000396548 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 MIPP30301 263 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 HDAC4P56524 1084 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 CYP1B1Q16678 543 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 HFE2Q6ZVN8 426 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 IL37Q9NZH6 218 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 MTRRQ9UBK8 725 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIM39-204ENST00000396548 HSF2BPO75031 334 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 FGBP02675 491 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 MATKP42679 507 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 GPR17Q13304 367 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 SPATA2LQ8IUW3 424 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-204ENST00000396548 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-204ENST00000396548 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 C8orf48Q96LL4 319 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 PNKPQ96T60 521 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 AP1M1Q9BXS5 423 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 RAB21Q9UL25 225 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 YJEFN3A6XGL0 299 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 E7ENQ6 273 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 LONRF2Q1L5Z9 754 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 ANKS3Q6ZW76 656 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 RCOR2Q8IZ40 523 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 NPY6RQ99463 290 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 LRRC1Q9BTT6 524 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 CRISPLD1Q9H336 500 aa13.32□□□□□ -0.28
TRIM39-204ENST00000396548 DDX56Q9NY93 547 aaKnown RBP13.32□□□□□ -0.28
TRIM39-204ENST00000396548 CXXC1Q9P0U4 656 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-204ENST00000396548 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 H7C4K7 107 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 GJB5O95377 273 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 H2AFXP16104 143 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 NFE2Q16621 373 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 PRELID2Q8N945 189 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 HERVK_113Q902F9 699 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 LRRC4Q9HBW1 653 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 CCDC188H7C350 402 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 ZBED1O96006 694 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 SOD2P04179 222 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 CDKN2BP42772 138 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 COPS2P61201 443 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 EIF4EBP2Q13542 120 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 USP41Q3LFD5 358 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 SLC25A52Q3SY17 297 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 SEL1L2Q5TEA6 688 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 PRSS55Q6UWB4 352 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 RNF19BQ6ZMZ0 732 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 TTC9BQ8N6N2 239 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
TRIM39-204ENST00000396548 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-204ENST00000396548 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 KRIT1O00522 736 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 ADAM12O43184 909 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 RARAP10276 462 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 LAG3P18627 525 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SDC4P31431 198 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 DSG1Q02413 1049 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms