RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SLC6A14Q9UN76 642 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 TBC1D3BA6NDS4 549 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 HOXC11O43248 304 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 ENGP17813 658 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 TNNI1P19237 187 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 SLC6A11P48066 632 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 GFPT1Q06210 699 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 SLC39A14Q15043 492 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 SNRNP35Q16560 246 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 WDR72Q3MJ13 1102 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 HECTD3Q5T447 861 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 TMEFF1Q8IYR6 380 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 PGBD3Q8N328 593 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 HMGB4Q8WW32 186 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 GATA6Q92908 595 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 CLIC6Q96NY7 704 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 TMEM121BQ9BXQ6 578 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 CGNQ9P2M7 1197 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 ZZEF1O43149 2961 aa18.61■□□□□ 0.57
EXOSC3-202ENST00000396521 ZNF217O75362 1048 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 PTGER3P43115 390 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 SEMA3BQ13214 749 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 TRPC3Q13507 836 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 PSMD6Q15008 389 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 LY6G5CQ5SRR4 150 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 DEFB124Q8NES8 71 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 ZNF507Q8TCN5 953 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 RLN3Q8WXF3 142 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 SYAP1Q96A49 352 aaPredicted RBP18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 TNIP3Q96KP6 325 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 MRPL45Q9BRJ2 306 aaKnown RBP18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 MSRB2Q9Y3D2 182 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 SH3BP1Q9Y3L3 701 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 STARD13Q9Y3M8 1113 aa18.6■□□□□ 0.57
EXOSC3-202ENST00000396521 TCRBV21S2A2A0A5A6 115 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 A8MXQ7 604 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 ADAM23O75077 832 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 CST3P01034 146 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 SERPINF2P08697 491 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 DLATP10515 647 aaKnown RBP18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 HNRNPLP14866 589 aaKnown RBP eCLIP18.59■□□□□ 0.571e-7■■□□□ 14
EXOSC3-202ENST00000396521 CUL4AQ13619 759 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 SDE2Q6IQ49 451 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 CNNM4Q6P4Q7 775 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 PIP4P1Q86T03 277 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 ETFBKMTQ8IXQ9 262 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 ZNF513Q8N8E2 541 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 FBXO32Q969P5 355 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 FAM84AQ96KN4 292 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 CGRRF1Q99675 332 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 FGFBP2Q9BYJ0 223 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 VRTNQ9H8Y1 702 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 TMEM74BQ9NUR3 256 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 IL37Q9NZH6 218 aa18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 MBD1Q9UIS9 605 aaPredicted RBP18.59■□□□□ 0.57
EXOSC3-202ENST00000396521 UBE4BO95155 1302 aa18.58■□□□□ 0.57
EXOSC3-202ENST00000396521 NUP205Q92621 2012 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 COCHO43405 550 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 CFIP05156 583 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 SYPP08247 313 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 NTSR1P30989 418 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 MAPK8P45983 427 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 AP3M2P53677 418 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 SLC14A1Q13336 389 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 EMC10Q5UCC4 262 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 PHTF2Q8N3S3 785 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 XXYLT1Q8NBI6 393 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 PANK2Q9BZ23 570 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF518BQ9C0D4 1074 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 DMAP1Q9NPF5 467 aaPredicted RBP18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 SPHK2Q9NRA0 654 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 KBTBD4Q9NVX7 518 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 ANAPC1Q9H1A4 1944 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 ZFYVE26Q68DK2 2539 aa18.58■□□□□ 0.56
EXOSC3-202ENST00000396521 THADAQ6YHU6 1953 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM92AA1XBS5 289 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM221BA6H8Z2 402 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 OPHN1O60890 802 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 TULP3O75386 442 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 SIM1P81133 766 aaPredicted RBP18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 RPL6Q02878 288 aaKnown RBP18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 CYP24A1Q07973 514 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 MESP2Q0VG99 397 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF423Q2M1K9 1284 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 EPM2AIP1Q7L775 607 aaPredicted RBP18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 C12orf40Q86WS4 652 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 TERB1Q8NA31 727 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 ZFRQ96KR1 1074 aaKnown RBP18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 B3GNT5Q9BYG0 378 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 NACA2Q9H009 215 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM124BQ9H5Z6 455 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms