RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 TCF25Q9BQ70 676 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 ULBP1Q9BZM6 244 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 COMMD8Q9NX08 183 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 STAP1Q9ULZ2 295 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 ALG6Q9Y672 507 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 SAR1BQ9Y6B6 198 aa16.17■□□□□ 0.18
VAMP1-202ENST00000396308 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 PRRG1O14668 218 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 CXCL14O95715 111 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 ATP1A1P05023 1023 aaKnown RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 LINC00271P0C7V0 271 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 HAPLN1P10915 354 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 PDGFRAP16234 1089 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 COMTP21964 271 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 ALDH1A3P47895 512 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 ZNF143P52747 638 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 SLC5A3P53794 718 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 DAOAP59103 153 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 RPL7AP62424 266 aaKnown RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 RAB33AQ14088 237 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 TAF12Q16514 161 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 HADHQ16836 314 aaKnown RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 ELMSAN1Q6PJG2 1045 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 BTBD6Q96KE9 485 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 SPATA17Q96L03 361 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 GDF15Q99988 308 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 C17orf80Q9BSJ5 609 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 CNPY3Q9BT09 278 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 RXFP1Q9HBX9 757 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 NGRNQ9NPE2 291 aaKnown RBP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.16■□□□□ 0.18
VAMP1-202ENST00000396308 MTUS1Q9ULD2 1270 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
VAMP1-202ENST00000396308 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 H0YGN5 161 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 DPYSL4O14531 572 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 PSTPIP1O43586 416 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 GRAP2O75791 330 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 GJB6O95452 261 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 LTFP02788 710 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 ATF2P15336 505 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 CETN2P41208 172 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 DNA2P51530 1060 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 YWHAZP63104 245 aaKnown RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 DUSP4Q13115 394 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 CLUL1Q15846 466 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 ZFYVE27Q5T4F4 411 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 CCDC181Q5TID7 509 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 PAPD7Q5XG87 772 aaKnown RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 DENND5BQ6ZUT9 1274 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 EMC1Q8N766 993 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 JOSD2Q8TAC2 188 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 POF1BQ8WVV4 589 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 AUTS2Q8WXX7 1259 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 GOLPH3Q9H4A6 298 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 POPDC2Q9HBU9 364 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 ALG13Q9NP73 1137 aaKnown RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 TMEM59LQ9UK28 342 aa16.15■□□□□ 0.18
VAMP1-202ENST00000396308 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
VAMP1-202ENST00000396308 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 ADAM12O43184 909 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 NCK2O43639 380 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PRLRP16471 622 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 CTNNA2P26232 953 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PTPN9P43378 593 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PTPROQ16827 1216 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 DDR2Q16832 855 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PLPP4Q5VZY2 271 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 GPRIN1Q7Z2K8 1008 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 CLEC4CQ8WTT0 213 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 RXFP2Q8WXD0 754 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PBKQ96KB5 322 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 TLR10Q9BXR5 811 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 TRIM7Q9C029 511 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 TMEM30AQ9NV96 361 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 TMEM51Q9NW97 253 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 PACSIN2Q9UNF0 486 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-202ENST00000396308 SLC27A5Q9Y2P5 690 aa16.14■□□□□ 0.17
VAMP1-202ENST00000396308 CES2O00748 559 aa16.13■□□□□ 0.17
VAMP1-202ENST00000396308 KCNK3O14649 394 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms