RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 ICA1Q05084 483 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 FOXD4Q12950 439 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 UBXN2BQ14CS0 331 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 TTF1Q15361 905 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 RABL6Q3YEC7 729 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 CT47A1Q5JQC4 288 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 PLPP4Q5VZY2 271 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 NAA16Q6N069 864 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 TSSK4Q6SA08 328 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 ATG9AQ7Z3C6 839 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 PTRH1Q86Y79 214 aaKnown RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 CDK5RAP1Q96SZ6 601 aaKnown RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 ENTPD7Q9NQZ7 604 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 SLC2A4RGQ9NR83 387 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 HDAC6Q9UBN7 1215 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 KLK13Q9UKR3 277 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 LZTS1Q9Y250 596 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 CREBBPQ92793 2442 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 RALGAPA1Q6GYQ0 2036 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CCDC163A0A0D9SF12 145 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CCDC66A2RUB6 948 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 MAN2B1O00754 1011 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 GPR42O15529 346 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CUTAO60888 179 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CLASP2O75122 1294 aaKnown RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 FGF18O76093 207 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 WEE2P0C1S8 567 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 PTMSP20962 102 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CSF2RBP32927 897 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 DNM2P50570 870 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SCAPQ12770 1279 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 HLTFQ14527 1009 aaKnown RBP eCLIP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 USP10Q14694 798 aaKnown RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF568Q3ZCX4 644 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SPOUT1Q5T280 376 aaKnown RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SYCP2LQ5T4T6 812 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 DDX42Q86XP3 938 aaKnown RBP eCLIP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 THNSL1Q8IYQ7 743 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 DNERQ8NFT8 737 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SCFD2Q8WU76 684 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SUCLG2Q96I99 432 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CCDC8Q9H0W5 538 aaPredicted RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 DEF6Q9H4E7 631 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 BICC1Q9H694 974 aaKnown RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 ARNT2Q9HBZ2 717 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 ADD3Q9UEY8 706 aaKnown RBP6.23□□□□□ -1.41
AP3S1-202ENST00000395548 MCM8Q9UJA3 840 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 CBLCQ9ULV8 474 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 NOTCH2Q04721 2471 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 SALL3Q9BXA9 1300 aa6.23□□□□□ -1.41
AP3S1-202ENST00000395548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 STAG3L1P0CL83 205 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 GP1BBP13224 206 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 CSRP3P50461 194 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 JAM2P57087 298 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 CFHR1Q03591 330 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 MVPQ14764 893 aaKnown RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 ICAM4Q14773 271 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 FAM83BQ5T0W9 1011 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 SERINC5Q86VE9 423 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 KLHDC4Q8TBB5 520 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 STAMQ92783 540 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 CLDN23Q96B33 292 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 MAGEB10Q96LZ2 347 aaPredicted RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 MYADMQ96S97 322 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 TCF25Q9BQ70 676 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 DDX23Q9BUQ8 820 aaKnown RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 ARRDC1-AS1Q9H2J1 176 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 SLC32A1Q9H598 525 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 RAVER2Q9HCJ3 691 aaKnown RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 A1CFQ9NQ94 594 aaKnown RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 NDOR1Q9UHB4 597 aa6.22□□□□□ -1.41
AP3S1-202ENST00000395548 MRPS17Q9Y2R5 130 aaKnown RBP6.22□□□□□ -1.41
AP3S1-202ENST00000395548 FBN3Q75N90 2809 aa6.21□□□□□ -1.41
AP3S1-202ENST00000395548 RELNP78509 3460 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 IFRD1O00458 451 aaPredicted RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 CNOT4O95628 575 aaKnown RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 MYCLP1P12525 358 aaPredicted RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 CCR3P51677 355 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 MLF2Q15773 248 aaPredicted RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 DGKDQ16760 1214 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 LETM2Q2VYF4 491 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 WDR72Q3MJ13 1102 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 COLEC12Q5KU26 742 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 CXXC5Q7LFL8 322 aaKnown RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 GPR149Q86SP6 731 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 GPATCH11Q8N954 259 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 ZSWIM2Q8NEG5 633 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 RSAD2Q8WXG1 361 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 MRPS27Q92552 414 aaKnown RBP6.21□□□□□ -1.42
AP3S1-202ENST00000395548 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 KAZALD1Q96I82 304 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 LMF1Q96S06 567 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 EDEM2Q9BV94 578 aa6.21□□□□□ -1.42
AP3S1-202ENST00000395548 KLC2Q9H0B6 622 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms