RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CBX4O00257 560 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 GPC1P35052 558 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TC2NQ8N9U0 490 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 INPP5DQ92835 1189 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TMEM176AQ96HP8 235 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CDK5RAP1Q96SZ6 601 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CBWD1Q9BRT8 395 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CLPBQ9H078 707 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 IARS2Q9NSE4 1012 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 DDX43Q9NXZ2 648 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 H3BRB1 525 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 FOXN3O00409 490 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 PCNAP12004 261 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 GRK3P35626 688 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 KRT78Q8N1N4 520 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TADA1Q96BN2 335 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 FICDQ9BVA6 458 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TRIM49D1C9J1S8 452 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 NDUFB5O43674 189 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CAND2O75155 1236 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 SUPT7LO94864 414 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ITGALP20701 1170 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 HERVK_113P62684 666 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CXCL9Q07325 125 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 GALNTL6Q49A17 601 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 GALNT4Q8N4A0 578 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 XPO6Q96QU8 1125 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 EHD4Q9H223 541 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 THG1LQ9NWX6 298 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CRTAMO95727 393 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TCF3P15923 654 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ANXA11P50995 505 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 GIT2Q14161 759 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 MAP1SQ66K74 1059 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 SLC13A5Q86YT5 568 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 VPS50Q96JG6 964 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ADGRE3Q9BY15 652 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 UBE2OQ9C0C9 1292 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CSDE1O75534 798 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TROAPQ12815 778 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 DYNC1I2Q13409 638 aaKnown RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TRIM60Q495X7 471 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 TFDP3Q5H9I0 405 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 SETD3Q86TU7 594 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 DDX42Q86XP3 938 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ELOA2Q8IYF1 753 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ERP27Q96DN0 273 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 ZSWIM1Q9BR11 485 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 VIPAS39Q9H9C1 493 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 LNPEPQ9UIQ6 1025 aa10.74□□□□□ -0.69
COL4A6-203ENST00000394872 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A6-203ENST00000394872 CYP11B1P15538 503 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 S100A5P33763 92 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SERPINB8P50452 374 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 TKTL1P51854 596 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PMS1P54277 932 aaKnown RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 FAM136AQ96C01 138 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 KRCC1Q9NPI7 259 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 AP4E1Q9UPM8 1137 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 AMHP03971 560 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CXCL8P10145 99 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DSG3P32926 999 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PLIN5Q00G26 463 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PGM5Q15124 567 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ICE2Q659A1 982 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 OTOAQ7RTW8 1153 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF614Q8N883 585 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ERGIC2Q96RQ1 377 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 THUMPD3Q9BV44 507 aaKnown RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ISCUQ9H1K1 167 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SCN3BQ9NY72 215 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 FAM47E-STBD1D6RA91 191 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PLOD1Q02809 727 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 BST2Q10589 180 aaKnown RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 MFSD10Q14728 455 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PGS1Q32NB8 556 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DENND1BQ6P3S1 775 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 KCNF1Q9H3M0 494 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ITGA11Q9UKX5 1188 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 USP18Q9UMW8 372 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 TIMM13Q9Y5L4 95 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 TAF6LQ9Y6J9 622 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CPS1P31327 1500 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PCYT1AP49585 367 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 RAB27AP51159 221 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 MYL6P60660 151 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 FBXO47Q5MNV8 452 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SLC44A2Q8IWA5 706 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SYTL5Q8TDW5 730 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CCT8L2Q96SF2 557 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ZSCAN32Q9NX65 697 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PCDHB5Q9Y5E4 795 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms