RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 COPS5Q92905 334 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 CDT1Q9H211 546 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 PCDH9Q9HC56 1237 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 ZNF148Q9UQR1 794 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 NFICP08651 508 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 CXCL8P10145 99 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 FGFR1P11362 822 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 GABRB2P47870 512 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 TAF5Q15542 800 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 TRNP1Q6NT89 227 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 RHPN2Q8IUC4 686 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 GPC2Q8N158 579 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 RIBC1Q8N443 379 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-204ENST00000394601 LINC01465Q8N7H1 131 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 NAT8LQ8N9F0 302 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-204ENST00000394601 DDX56Q9NY93 547 aaKnown RBP16.22■□□□□ 0.19
PTBP1-204ENST00000394601 RBPJLQ9UBG7 517 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 CHKBQ9Y259 395 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 ALADP13716 330 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 SLC18A1P54219 525 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 DBN1Q16643 649 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 SMTNL2Q2TAL5 461 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 MZB1Q8WU39 189 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 CPT1BQ92523 772 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 TCHPQ9BT92 498 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 DHRS4Q9BTZ2 278 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 PHTF1Q9UMS5 762 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 PRPF4O43172 522 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■□□□ 11.5
PTBP1-204ENST00000394601 TYROBPO43914 113 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 CA4P22748 312 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 ORC1Q13415 861 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 DCUN1D2Q6PH85 259 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 THNSL1Q8IYQ7 743 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 NLGN2Q8NFZ4 835 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 ELOVL4Q9GZR5 314 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
PTBP1-204ENST00000394601 PPP1R1BQ9UD71 204 aaPredicted RBP16.21■□□□□ 0.19
PTBP1-204ENST00000394601 ZFP69BQ9UJL9 534 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 SHOC2Q9UQ13 582 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 TCRBV7S3A2A0A539 114 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 A6NJR5 290 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 OSTNP61366 133 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 THOC5Q13769 683 aaKnown RBP16.21■□□□□ 0.19
PTBP1-204ENST00000394601 RASA2Q15283 850 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 SURF1Q15526 300 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 RAB6CQ53S08 254 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 ZNF276Q8N554 614 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 CFAP61Q8NHU2 1237 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 RAB6CQ9H0N0 254 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 RNPEPQ9H4A4 650 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 ETNK2Q9NVF9 386 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 STOML1Q9UBI4 398 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 TNFSF13BQ9Y275 285 aa16.21■□□□□ 0.19
PTBP1-204ENST00000394601 USP1O94782 785 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 ENDOD1O94919 500 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 SPATA31D3P0C874 917 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CYP3A5P20815 502 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 KDELR1P24390 212 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MTFR1Q15390 333 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 SPATA31D4Q6ZUB0 917 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 BBS12Q6ZW61 710 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 EMC1Q8N766 993 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CMASQ8NFW8 434 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 ACTL9Q8TC94 416 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CLIC5Q9NZA1 410 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 ARMCX1Q9P291 453 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 RABGEF1Q9UJ41 708 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 E7ESA3 106 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 GYG2O15488 501 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 C22orf31O95567 290 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 OTUD4Q01804 1114 aaKnown RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 BTKQ06187 659 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 ASRGL1Q7L266 308 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 ARL10Q8N8L6 244 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MCRS1Q96EZ8 462 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 C2orf40Q9H1Z8 148 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MMADHCQ9H3L0 296 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 TRIP11Q15643 1979 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CILPO75339 1184 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 KRT3P12035 628 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CLCN3P51790 818 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 USP46P62068 366 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 RGS9BPQ6ZS82 235 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 VRTNQ9H8Y1 702 aa16.2■□□□□ 0.18
PTBP1-204ENST00000394601 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms