RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 CRYBG2Q8N1P7 616 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 FBXO32Q969P5 355 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 SMARCD1Q96GM5 515 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 TNIP3Q96KP6 325 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 TWNKQ96RR1 684 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 MED10Q9BTT4 135 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 APOBEC3GQ9HC16 384 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 GDPD2Q9HCC8 539 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.691e-6■■■■■ 57.1
PDLIM7-205ENST00000393551 KRT82Q9NSB4 513 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 CFAP97Q9P2B7 532 aa19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 MYO18AQ92614 2054 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-205ENST00000393551 A0A1W2PQ27 194 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 A0A1W2PQ64 194 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 A0A1W2PQD8 194 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 MAPK13O15264 365 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CALUO43852 315 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 RTN3O95197 1032 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 TRIM49P0CI25 452 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 TRIM49CP0CI26 452 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 MBL2P11226 248 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 NR2F2P24468 414 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 VAMP7P51809 220 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 NR1H3Q13133 447 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 DHCR24Q15392 516 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CSRP2Q16527 193 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 RHBDF2Q6PJF5 856 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CEP68Q76N32 757 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CAMKK1Q8N5S9 505 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 KIAA1958Q8N8K9 716 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 SLC2A14Q8TDB8 520 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 TAS1R2Q8TE23 839 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 OVCA2Q8WZ82 227 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 TAF4BQ92750 862 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 WBP2Q969T9 261 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CCSER2Q9H7U1 834 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 CSNK1G1Q9HCP0 422 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 DMAP1Q9NPF5 467 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
PDLIM7-205ENST00000393551 ABCA7Q8IZY2 2146 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 RPP40O75818 363 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 AP1G2O75843 785 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 CLSTN1O94985 981 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 ZNF202O95125 648 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 SLC6A11P48066 632 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 GCLMP48507 274 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 MCCD1P59942 119 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 DMC1Q14565 340 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 ZCWPW2Q504Y3 356 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 PRR23CQ6ZRP0 262 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 C12orf40Q86WS4 652 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 GUF1Q8N442 669 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 USP33Q8TEY7 942 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 FAM49BQ9NUQ9 324 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 GMIPQ9P107 970 aa19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 CNOT1A5YKK6 2376 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-205ENST00000393551 ATP8B3O60423 1300 aa19.33■□□□□ 0.69
PDLIM7-205ENST00000393551 GDF9O60383 454 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 PIK3CAP42336 1068 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 MAP3K7CLP57077 242 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 INCA1Q0VD86 236 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 HECTD3Q5T447 861 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 GPRIN1Q7Z2K8 1008 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 UNC93AQ86WB7 457 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 PDZD8Q8NEN9 1154 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 WHAMMQ8TF30 809 aa19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 CDV3Q9UKY7 258 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-205ENST00000393551 DCDC2BA2VCK2 349 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 HHLA1C9JL84 531 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 DCLK1O15075 740 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 AXIN1O15169 862 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 P4HA1P13674 534 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 HNRNPLP14866 589 aaKnown RBP eCLIP19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 SEC13P55735 322 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 CCDC6Q16204 474 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 C2orf27AQ580R0 203 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 CACNA2D4Q7Z3S7 1137 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 SMYD4Q8IYR2 804 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 EXOC4Q96A65 974 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 EEF2KMTQ96G04 330 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 ZC3H10Q96K80 434 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 ARRDC1-AS1Q9H2J1 176 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 COMMD8Q9NX08 183 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 EBF1Q9UH73 591 aa19.32■□□□□ 0.68
PDLIM7-205ENST00000393551 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 E2F8A0AVK6 867 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 SLC9A3R1O14745 358 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 SDHBP21912 280 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 TUBP50607 506 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 ADAM9Q13443 819 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 CLEC20AQ6ZU45 233 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 INTS8Q75QN2 995 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 FAM186BQ8IYM0 893 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 PHTF2Q8N3S3 785 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 HNRNPABQ99729 332 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 RTKNQ9BST9 563 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 RXFP3Q9NSD7 469 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 OSER1Q9NX31 292 aa19.31■□□□□ 0.68
PDLIM7-205ENST00000393551 A0A0A0MRY4 1105 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms