RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ZSCAN5DPP0CG00 497 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 DARSP14868 501 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 CYP2F1P24903 491 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 HSPA9P38646 679 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 NNMTP40261 264 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 HARS2P49590 506 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 MROH9Q5TGP6 573 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 MID2Q9UJV3 735 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 PTK7Q13308 1070 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 PDK2Q15119 407 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 ELMSAN1Q6PJG2 1045 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 TAS2R42Q7RTR8 314 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 HELQQ8TDG4 1101 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 TTYH3Q9C0H2 523 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 PCMTD2Q9NV79 361 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 TUBGCP4Q9UGJ1 667 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 CKMP06732 381 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 ESRRAP11474 423 aaPredicted RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 PTPN1P18031 435 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 RPL21P46778 160 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 RAB27AP51159 221 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 TWF1Q12792 350 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 PIGZQ86VD9 579 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 ST6GALNAC4Q9H4F1 302 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 LSM7Q9UK45 103 aaKnown RBP17.15■□□□□ 0.34
SNX9-201ENST00000392185 ITGB4P16144 1822 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 H3BQF6 201 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 RPLP2P05387 115 aaKnown RBP17.14■□□□□ 0.34
SNX9-201ENST00000392185 SLC6A3Q01959 620 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 LRIG3Q6UXM1 1119 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 TMC7Q7Z402 723 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 STKLD1Q8NE28 680 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 MTIF3Q9H2K0 278 aaKnown RBP17.14■□□□□ 0.34
SNX9-201ENST00000392185 SMPD4Q9NXE4 827 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 PSMC3IPQ9P2W1 217 aaPredicted RBP17.14■□□□□ 0.34
SNX9-201ENST00000392185 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.34
SNX9-201ENST00000392185 C2CD2Q9Y426 696 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 ADGRA3Q8IWK6 1321 aa17.14■□□□□ 0.34
SNX9-201ENST00000392185 CLDN5O00501 218 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 CFLARO15519 480 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 CRYBB1P53674 252 aaPredicted RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 CYP4F11Q9HBI6 524 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 IRS2Q9Y4H2 1338 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 TPD52P55327 224 aaPredicted RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 TADA2BQ86TJ2 420 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 FBXO36Q8NEA4 188 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 RPS6KL1Q9Y6S9 549 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 CAND2O75155 1236 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 ASGR1P07306 291 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 RARGP13631 454 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 CASP2P42575 452 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 SLC39A12Q504Y0 691 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 TFAP2DQ7Z6R9 452 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 PRUNE1Q86TP1 453 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 SCG3Q8WXD2 468 aaKnown RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 CAPNS2Q96L46 248 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 RAB3IPQ96QF0 476 aaPredicted RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 CCT8L2Q96SF2 557 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 EIF2AQ9BY44 585 aaKnown RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 KCND1Q9NSA2 647 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 C20orf96Q9NUD7 363 aaPredicted RBP17.14■□□□□ 0.33
SNX9-201ENST00000392185 DSEQ9UL01 958 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
SNX9-201ENST00000392185 C4BPAP04003 597 aaKnown RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 BRCC3P46736 316 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 IRAK1P51617 712 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 GTF2A1P52655 376 aaPredicted RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 ANO4Q32M45 955 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 STRCQ7RTU9 1775 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 CD99L2Q8TCZ2 262 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 FOXP3Q9BZS1 431 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 DIAPH2O60879 1101 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 GRM5P41594 1212 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 NTPCRQ9BSD7 190 aaKnown RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 SASH3O75995 380 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 LSP1P33241 339 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 CRHR2Q13324 411 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 NAA25Q14CX7 972 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 ERMARDQ5T6L9 678 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 NDUFAF2Q8N183 169 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 STAMBPL1Q96FJ0 436 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 MOSPD1Q9UJG1 213 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 AJAP1Q9UKB5 411 aaPredicted RBP17.13■□□□□ 0.33
SNX9-201ENST00000392185 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
SNX9-201ENST00000392185 NT5C1B-RDH14C9J2C7 533 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 FBXO21O94952 628 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms