RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 PTPN9P43378 593 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 NDUFV1P49821 464 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 CACNA2D1P54289 1103 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 MRPS5P82675 430 aaKnown RBP12.84□□□□□ -0.35
TMCO1-202ENST00000392129 YWHAHQ04917 246 aaPredicted RBP12.84□□□□□ -0.35
TMCO1-202ENST00000392129 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
TMCO1-202ENST00000392129 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 FAM172AQ8WUF8 416 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 SLCO2A1Q92959 643 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 NCAPGQ9BPX3 1015 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
TMCO1-202ENST00000392129 DDX23Q9BUQ8 820 aaKnown RBP12.84□□□□□ -0.35
TMCO1-202ENST00000392129 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 CSNK1G1Q9HCP0 422 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 EFR3BQ9Y2G0 817 aa12.84□□□□□ -0.35
TMCO1-202ENST00000392129 TTC3P53804 2025 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 HOXA2O43364 376 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TRAPPC3O43617 180 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TADA2AO75478 443 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 GATMP50440 423 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TKTL1P51854 596 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 SNX1Q13596 522 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TAZQ16635 292 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 BOLA3Q53S33 107 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.362e-9■■■■□ 21.3
TMCO1-202ENST00000392129 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 SIX6OS1Q8N1H7 587 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 NDRG1Q92597 394 aaKnown RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 CENPIQ92674 756 aaPredicted RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TMEM209Q96SK2 561 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 FEZ2Q9UHY8 353 aaPredicted RBP12.83□□□□□ -0.36
TMCO1-202ENST00000392129 TBX21Q9UL17 535 aa12.83□□□□□ -0.36
TMCO1-202ENST00000392129 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 NRP1O14786 923 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 HSF2BPO75031 334 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 FBXO21O94952 628 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 OAZ2O95190 189 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ECEL1O95672 775 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ALDH2P05091 517 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 FAM153BP0C7A2 387 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ECHS1P30084 290 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 MATKP42679 507 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 GJA8P48165 433 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 HDAC4P56524 1084 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
TMCO1-202ENST00000392129 TSPY1Q01534 308 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 HLTFQ14527 1009 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMCO1-202ENST00000392129 FAM153CQ494X1 144 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 SCYL2Q6P3W7 929 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 NPAS4Q8IUM7 802 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 HSPH1Q92598 858 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 TRIM31Q9BZY9 425 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 DPH5Q9H2P9 285 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 OGFRQ9NZT2 677 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 FAM153AQ9UHL3 310 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ATP11BQ9Y2G3 1177 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 RRP9O43818 475 aaKnown RBP12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ENDOD1O94919 500 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 CD48P09326 243 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
TMCO1-202ENST00000392129 BDNFP23560 247 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 NNTQ13423 1086 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 DEFB106AQ8N104 65 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 FAM149B1Q96BN6 582 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 TBCBQ99426 244 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ULBP1Q9BZM6 244 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 CNGB3Q9NQW8 809 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 TMEM39AQ9NV64 488 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 ADAM28Q9UKQ2 775 aa12.82□□□□□ -0.36
TMCO1-202ENST00000392129 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
TMCO1-202ENST00000392129 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
TMCO1-202ENST00000392129 SYN3O14994 580 aa12.81□□□□□ -0.36
TMCO1-202ENST00000392129 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
TMCO1-202ENST00000392129 ARSEP51690 589 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms