RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PPP1R26Q5T8A7 1209 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 FAM3CQ92520 227 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 MED15Q96RN5 788 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 DLGAP2Q9P1A6 1054 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 SCML2Q9UQR0 700 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 MIA3Q5JRA6 1907 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 BEST1O76090 585 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 ABL1P00519 1130 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 SETSIPP0DME0 302 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 CD19P15391 556 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 CTHP32929 405 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
GGPS1-203ENST00000391855 TCF15Q12870 199 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 RUNX3Q13761 415 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 LRRC32Q14392 662 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 GBP6Q6ZN66 633 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 CPA6Q8N4T0 437 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 ATP2A3Q93084 1043 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 INTS2Q9H0H0 1204 aaKnown RBP13.38□□□□□ -0.27
GGPS1-203ENST00000391855 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 GMIPQ9P107 970 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 PCDHB4Q9Y5E5 795 aa13.38□□□□□ -0.27
GGPS1-203ENST00000391855 MYH10P35580 1976 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 NFATC1O95644 943 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 MBL2P11226 248 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 ACO1P21399 889 aaKnown RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 KIF11P52732 1056 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 GOLGA7BQ2TAP0 167 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 TMEM270Q6UE05 265 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 CCDC186Q7Z3E2 898 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 IRF2BP1Q8IU81 584 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 ZFYVE19Q96K21 471 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 CYP2S1Q96SQ9 504 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 CDK5RAP1Q96SZ6 601 aaKnown RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 HPS4Q9NQG7 708 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
GGPS1-203ENST00000391855 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 CPQQ9Y646 472 aa13.37□□□□□ -0.27
GGPS1-203ENST00000391855 MYO16Q9Y6X6 1858 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 TRIOO75962 3097 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 LEFTY2O00292 366 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 O00370 1275 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 XPO1O14980 1071 aaKnown RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 TLR5O60602 858 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 NHLH1Q02575 133 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 NR1H3Q13133 447 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 DGKKQ5KSL6 1271 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 KLHDC10Q6PID8 442 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 GPRIN1Q7Z2K8 1008 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 PIGZQ86VD9 579 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 ZNF276Q8N554 614 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 RBBP8NLQ8NC74 664 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 RIN3Q8TB24 985 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 NACA2Q9H009 215 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 CLIC5Q9NZA1 410 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 CHORDC1Q9UHD1 332 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
GGPS1-203ENST00000391855 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
GGPS1-203ENST00000391855 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 COCHO43405 550 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 CD72P21854 359 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 EEF1GP26641 437 aaKnown RBP13.35□□□□□ -0.27
GGPS1-203ENST00000391855 ZNF132P52740 706 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 MFAP3P55082 362 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 TNK2Q07912 1038 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 GOLGA8FQ08AF8 430 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 GOLGA8DPQ0D2H9 430 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 ANGPT1Q15389 498 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 STX1AQ16623 288 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 MEA1Q16626 185 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 EXOC3L4Q17RC7 722 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 EML3Q32P44 896 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms