RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 XPNPEP3Q9NQH7 507 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SACM1LQ9NTJ5 587 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 DDX20Q9UHI6 824 aaKnown RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 L1RE1Q9UN81 338 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SCAF8Q9UPN6 1271 aaKnown RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 LOC102723971A0A1B0GUV8 181 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 CFAP69A5D8W1 941 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 UBE2Q2LH0YL09 131 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 PYCARD-AS1I3L0S3 204 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 CES2O00748 559 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 FCHO1O14526 889 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 RASAL1O95294 804 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 BRAFP15056 766 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 ATP5F1P24539 256 aaPredicted RBP4.12□□□□□ -1.75
TRAV40-201ENST00000390467 KLRC1P26715 233 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 MMP13P45452 471 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 PTDSS1P48651 473 aaKnown RBP4.12□□□□□ -1.75
TRAV40-201ENST00000390467 DIO1P49895 249 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 ITGA8P53708 1063 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 RPS16P62249 146 aaKnown RBP4.12□□□□□ -1.75
TRAV40-201ENST00000390467 RABEP1Q15276 862 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 SEC23BQ15437 767 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 PTCHD4Q6ZW05 846 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 LINC01465Q8N7H1 131 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 PNISRQ8TF01 805 aaKnown RBP4.12□□□□□ -1.75
TRAV40-201ENST00000390467 VN1R3Q9BXE9 311 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 ZSCAN32Q9NX65 697 aa4.12□□□□□ -1.75
TRAV40-201ENST00000390467 TUBA8Q9NY65 449 aaPredicted RBP4.12□□□□□ -1.75
TRAV40-201ENST00000390467 ADAM10O14672 748 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 FRS3O43559 492 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 GCATO75600 419 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 COPB1P53618 953 aaKnown RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 TIRAPP58753 221 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 SUMO2P61956 95 aaKnown RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 ZNF268Q14587 947 aaPredicted RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 NPY5RQ15761 445 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 NFE2Q16621 373 aaPredicted RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 ZNF813Q6ZN06 617 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 TECPR1Q7Z6L1 1165 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 MAGEB6Q8N7X4 407 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 ZNF398Q8TD17 642 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 NMD3Q96D46 503 aaKnown RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 STK31Q9BXU1 1019 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 TRNAU1APQ9NX07 287 aaKnown RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 COL20A1Q9P218 1284 aa4.11□□□□□ -1.75
TRAV40-201ENST00000390467 AFF4Q9UHB7 1163 aaKnown RBP4.11□□□□□ -1.75
TRAV40-201ENST00000390467 PSMD9O00233 223 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 CCP110O43303 1012 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 RASSF9O75901 435 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 BMP15O95972 392 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MT-CO3P00414 261 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 IL1R2P27930 398 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 EPHA3P29320 983 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 PRKAR1BP31321 381 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MCM5P33992 734 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MAPK7Q13164 816 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 LARS2Q15031 903 aaKnown RBP4.1□□□□□ -1.75
TRAV40-201ENST00000390467 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 CNGA2Q16280 664 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 INSCQ1MX18 579 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 ZNF750Q32MQ0 723 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MINDY4Q4G0A6 757 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MEX3CQ5U5Q3 659 aaKnown RBP4.1□□□□□ -1.75
TRAV40-201ENST00000390467 NXNQ6DKJ4 435 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 SESTD1Q86VW0 696 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 TCEAL8Q8IYN2 117 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 CHPFQ8IZ52 775 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 METTL25Q8N6Q8 603 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 NRACQ8N912 160 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MAFAQ8NHW3 353 aaPredicted RBP4.1□□□□□ -1.75
TRAV40-201ENST00000390467 ADAMTS18Q8TE60 1221 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 IGFBPL1Q8WX77 278 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 SUCLG2Q96I99 432 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 FYTTD1Q96QD9 318 aaKnown RBP4.1□□□□□ -1.75
TRAV40-201ENST00000390467 FAM118BQ9BPY3 351 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 C1orf112Q9NSG2 853 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 HDAC9Q9UKV0 1011 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 RIMKLBQ9ULI2 386 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 USP22Q9UPT9 525 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 AFG3L2Q9Y4W6 797 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 PAXBP1Q9Y5B6 917 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 EID1Q9Y6B2 187 aa4.1□□□□□ -1.75
TRAV40-201ENST00000390467 ISM1B1AKI9 464 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 BTBD19C9JJ37 291 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 TMEM232C9JQI7 657 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 M0R3H8 397 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 RGS10O43665 173 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 PIAS2O75928 621 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 CREB1P16220 341 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 ATF7P17544 494 aaPredicted RBP4.09□□□□□ -1.75
TRAV40-201ENST00000390467 ACVR2AP27037 513 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 NR4A2P43354 598 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 MTHFSP49914 203 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 KRTAP10-9P60411 292 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 FMO1Q01740 532 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 ARHGEF7Q14155 803 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 ARHGAP29Q52LW3 1261 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 AWAT2Q6E213 333 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms