RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PCYT1AP49585 367 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 MXI1P50539 228 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 VAMP7P51809 220 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 CDH15P55291 814 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 INAQ16352 499 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 PPP6R3Q5H9R7 873 aaPredicted RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 EGFLAMQ63HQ2 1017 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 CIAPIN1Q6FI81 312 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KBTBD6Q86V97 674 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 PPM1NQ8N819 430 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 ACSF2Q96CM8 615 aaPredicted RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 IVNS1ABPQ9Y6Y0 642 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 TISP43B9A030 160 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 J3QRK9 145 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 GIPC1O14908 333 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 CHMP2AO43633 222 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KDM1AO60341 852 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 FAM155BO75949 473 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF23P17027 643 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 GAP43P17677 238 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 S100A1P23297 94 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 DYNLT1P63172 113 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 NFX1Q12986 1120 aaKnown RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 STX3Q13277 289 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 RINT1Q6NUQ1 792 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 CLEC10AQ8IUN9 316 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 HSPH1Q92598 858 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 FBXL8Q96CD0 374 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 MMP19Q99542 508 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 ATAD5Q96QE3 1844 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 GOLGA8TH3BQL2 631 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 hCG_1984214I3L0E3 225 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KRT38O76015 456 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KLHL2O95198 593 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 SLC30A10Q6XR72 485 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 STXBP4Q6ZWJ1 553 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 FAM71AQ8IYT1 594 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 PDIK1LQ8N165 341 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF713Q8N859 430 aaPredicted RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 ACTRT2Q8TDY3 377 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KREMEN1Q96MU8 473 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KCNK16Q96T55 309 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 RAB20Q9NX57 234 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 UTP6Q9NYH9 597 aaKnown RBP19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 KAT6AQ92794 2004 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 SSTR3P32745 418 aaPredicted RBP19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 MFAP3P55082 362 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 RNF148Q8N7C7 305 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 CCDC127Q96BQ5 260 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 RGPD5Q99666 1765 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 ATRNL1Q5VV63 1379 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 PSMD12O00232 456 aaPredicted RBP19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 ZBTB39O15060 712 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 CFLARO15519 480 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF12P17014 697 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 GPR141Q7Z602 305 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 CATSPER1Q8NEC5 780 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 C20orf27Q9GZN8 174 aa19.71■□□□□ 0.75
SMARCD1-201ENST00000381513 TMX2-CTNND1H3BSU7 103 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 SLITRK3O94933 977 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 KRT1P04264 644 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 TTBK2Q6IQ55 1244 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 PGM2L1Q6PCE3 622 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 CNTN3Q9P232 1028 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 HESX1Q9UBX0 185 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 DNAJC16Q9Y2G8 782 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 MYPNQ86TC9 1320 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 CNOT3O75175 753 aaKnown RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 ITGAXP20702 1163 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 BASP1P80723 227 aaKnown RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 FLOT2Q14254 428 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 ATP2A3Q93084 1043 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 EME1Q96AY2 570 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 TPK1Q9H3S4 243 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 XAB2Q9HCS7 855 aaKnown RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 ARHGEF37A1IGU5 675 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 SDR42E2A6NKP2 422 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 GNPATO15228 680 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 EIF3DO15371 548 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 LYPLA1O75608 230 aaPredicted RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 HOXD11P31277 338 aaPredicted RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 ZNF34Q8IZ26 560 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 CMTM5Q96DZ9 223 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 C11orf70Q9BRQ4 267 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 GLI3P10071 1580 aa19.7■□□□□ 0.74
SMARCD1-201ENST00000381513 PNMA6FA0A0J9YX94 578 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 AIM2O14862 343 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A9O60656 530 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 SIN3BO75182 1162 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 WEE2P0C1S8 567 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A6P19224 532 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A1P22309 533 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A4P22310 534 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A3P35503 534 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 UGT1A5P35504 534 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 NEK2P51955 445 aa19.69■□□□□ 0.74
SMARCD1-201ENST00000381513 ZBTB17Q13105 803 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms