RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 FBXO32Q969P5 355 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 SHDQ96IW2 340 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 ZSWIM3Q96MP5 696 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 SPAG5Q96R06 1193 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 EHD2Q9NZN4 543 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 CA14Q9ULX7 337 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 DAAM1Q9Y4D1 1078 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
SNRPB-201ENST00000381342 MED7O43513 233 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 GFPT2O94808 682 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 SETSIPP0DME0 302 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 SLC8A3P57103 927 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 PTK2Q05397 1052 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 ZNF606Q8WXB4 792 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 MRPS31Q92665 395 aaKnown RBP17.05■□□□□ 0.32
SNRPB-201ENST00000381342 XPO4Q9C0E2 1151 aaKnown RBP17.05■□□□□ 0.32
SNRPB-201ENST00000381342 RBSNQ9H1K0 784 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 ZFP14Q9HCL3 533 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 SLC2A4RGQ9NR83 387 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 GMIPQ9P107 970 aa17.05■□□□□ 0.32
SNRPB-201ENST00000381342 KIF26AQ9ULI4 1882 aaPredicted RBP17.04■□□□□ 0.32
SNRPB-201ENST00000381342 ECI2O75521 394 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 SOX5P35711 763 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 PBX1P40424 430 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 RGS7P49802 495 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 PDE6CP51160 858 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 IER5LQ5T953 404 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 TXNDC8Q6A555 127 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 SMYD5Q6GMV2 418 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 CACNA2D4Q7Z3S7 1137 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 ZSCAN18Q8TBC5 510 aaPredicted RBP17.04■□□□□ 0.32
SNRPB-201ENST00000381342 SLITRK1Q96PX8 696 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 KXD1Q9BQD3 176 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 TRPC7Q9HCX4 862 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 IL37Q9NZH6 218 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 TRPM5Q9NZQ8 1165 aa17.04■□□□□ 0.32
SNRPB-201ENST00000381342 NCANO14594 1321 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 FAM92AA1XBS5 289 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 C2orf78A6NCI8 922 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 PRAMEF12O95522 483 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 FCARP24071 287 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 STAT1P42224 750 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 KIF11P52732 1056 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 GPC5P78333 572 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 ADIGQ0VDE8 80 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 RAB41Q5JT25 222 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 TAF3Q5VWG9 929 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
SNRPB-201ENST00000381342 MAB21L3Q8N8X9 362 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 EPS8L1Q8TE68 723 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 BAP1Q92560 729 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 ASB16Q96NS5 453 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 RPP25Q9BUL9 199 aaKnown RBP17.03■□□□□ 0.32
SNRPB-201ENST00000381342 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 TASP1Q9H6P5 420 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 ARHGEF3Q9NR81 526 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 COMMD8Q9NX08 183 aa17.03■□□□□ 0.32
SNRPB-201ENST00000381342 ZNF840PA6NDX5 716 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PIK3R2O00459 728 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 ABL1P00519 1130 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 CYP11B1P15538 503 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 AOC1P19801 751 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 GPD2P43304 727 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PGFP49763 221 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 TKTL1P51854 596 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 BPIFB4P59827 614 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 ARID5AQ03989 594 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 MEA1Q16626 185 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PMF1Q6P1K2 205 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 OVCA2Q8WZ82 227 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SMARCD2Q92925 531 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 E2F7Q96AV8 911 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SLC22A12Q96S37 553 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SLC46A2Q9BY10 475 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 ULBP1Q9BZM6 244 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SMG9Q9H0W8 520 aaKnown RBP17.02■□□□□ 0.32
SNRPB-201ENST00000381342 LRRC4Q9HBW1 653 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 CYTH4Q9UIA0 394 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 PCDHGC3Q9UN70 934 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 SCML2Q9UQR0 700 aa17.02■□□□□ 0.32
SNRPB-201ENST00000381342 FAM170AA1A519 330 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 DPYSL4O14531 572 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 AP5Z1O43299 807 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 CBFA2T2O43439 604 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 GABBR2O75899 941 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 TPM3P06753 285 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 USP17L7P0C7H9 530 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 LCP1P13796 627 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.314e-8■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms