RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 KLK14Q9P0G3 267 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CAPN9O14815 690 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 OGTO15294 1046 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 STAG3L1P0CL83 205 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 AMPD1P23109 780 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 THPOP40225 353 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 SERPINB4P48594 390 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 ITGA7Q13683 1181 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CCDC6Q16204 474 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 KRT39Q6A163 491 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 PXYLP1Q8TE99 480 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CADM1Q9BY67 442 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 NXF3Q9H4D5 531 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 ANAPC5Q9UJX4 755 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CDY2AQ9Y6F7 541 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 KLHL33A6NCF5 533 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CHRNA1P02708 482 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 NFICP08651 508 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 RALAP11233 206 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 NEFHP12036 1026 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 PSMD6Q15008 389 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 LRRC6Q86X45 466 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 GCOM2Q9BZD3 368 aaPredicted RBP12.12□□□□□ -0.47
PITRM1-202ENST00000380989 SNTG2Q9NY99 539 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 TNFSF13BQ9Y275 285 aa12.12□□□□□ -0.47
PITRM1-202ENST00000380989 CYP1A1P04798 512 aaPredicted RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 SCNN1BP51168 640 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 GPC5P78333 572 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 RBBP5Q15291 538 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 RNF180Q86T96 592 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 MAK16Q9BXY0 300 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 SAYSD1Q9NPB0 183 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 TRIP11Q15643 1979 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 LACTBL1A8MY62 500 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 ATP6V1C1P21283 382 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 BRD2P25440 801 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 C1QTNF8P60827 252 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 P3H1Q32P28 736 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
PITRM1-202ENST00000380989 MFSD5Q6N075 450 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 TMEM174Q8WUU8 243 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
PITRM1-202ENST00000380989 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 PODXLO00592 558 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 HOXC8P31273 242 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 KLC1Q07866 573 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 LRRN4Q8WUT4 740 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 CD101Q93033 1021 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.476e-6■■■■□ 19.7
PITRM1-202ENST00000380989 NFKBIZQ9BYH8 718 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 APOBEC3GQ9HC16 384 aaKnown RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 HLA-DRAP01903 254 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 KRT19P08727 400 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 GBP1P32455 592 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 JADE1Q6IE81 842 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 OR52E8Q6IFG1 317 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 RHBDF2Q6PJF5 856 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 BRSK2Q8IWQ3 736 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 SHCBP1LQ9BZQ2 653 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.1□□□□□ -0.47
PITRM1-202ENST00000380989 RNF208Q9H0X6 261 aa12.1□□□□□ -0.47
PITRM1-202ENST00000380989 VPS37BQ9H9H4 285 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms