RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 WDR60Q8WVS4 1066 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 SLC10A4Q96EP9 437 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 MECRQ9BV79 373 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM49AQ9H0Q0 323 aaPredicted RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 CDT1Q9H211 546 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ZFATQ9P243 1243 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 EME2A4GXA9 379 aaPredicted RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 HAUS5O94927 633 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 PIGRP01833 764 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 PYGBP11216 843 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 PHBP35232 272 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 RASSF2P50749 326 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 RCN1Q15293 331 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 MPZL3Q6UWV2 235 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 CDHR3Q6ZTQ4 885 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 NRG4Q8WWG1 115 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 PTCD3Q96EY7 689 aaKnown RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 CALN1Q9BXU9 219 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 CORO1CQ9ULV4 474 aaPredicted RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 TCRBV9S1A1TA0A576 114 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 KBTBD13C9JR72 458 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 GRAP2O75791 330 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 KRT3P12035 628 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 NEFHP12036 1026 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 KDELR1P24390 212 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 PTK7Q13308 1070 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 TTLL4Q14679 1199 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 ACSBG2Q5FVE4 666 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 MDH1BQ5I0G3 518 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 SH3PXD2AQ5TCZ1 1133 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 ARMCX2Q7L311 632 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 PRPF39Q86UA1 669 aaKnown RBP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 RFX6Q8HWS3 928 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 NLRP7Q8WX94 980 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 SMARCAD1Q9H4L7 1026 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 ZNF395Q9H8N7 513 aaPredicted RBP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 NMRK1Q9NWW6 199 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 DDX56Q9NY93 547 aaKnown RBP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM237BA0A1B0GVD1 139 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 A6NHS1 94 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 LACTBL1A8MY62 500 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 HOXC6P09630 235 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 PTPN7P35236 360 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 ZNF667Q5HYK9 610 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 WASHC2DQ5SRD0 308 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 ALYREFQ86V81 257 aaKnown RBP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 FBXO27Q8NI29 283 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 UCMAQ8WVF2 138 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 CPXM1Q96SM3 734 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 TRIM55Q9BYV6 548 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 TLE6Q9H808 572 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 LNPEPQ9UIQ6 1025 aa16.96■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM189A1O60320 539 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 SLC25A27O95847 323 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 MT-ND3P03897 115 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ZBTB16Q05516 673 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 APOL6Q9BWW8 343 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ATP6V1C1P21283 382 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 GJA5P36382 358 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ARFIP2P53365 341 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 EIF3EP60228 445 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 RASA2Q15283 850 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 FAXCQ5TGI0 409 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 PDIK1LQ8N165 341 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 DNAJC9Q8WXX5 260 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 MCM3APO60318 1980 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ACKR2O00590 384 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 GSC2O15499 205 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 LSM8O95777 96 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 STAG3L1P0CL83 205 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 RBP3P10745 1247 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ABCD1P33897 745 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 EPHX2P34913 555 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 ASPAP45381 313 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 YWHAGP61981 247 aaKnown RBP eCLIP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 PSMC1P62191 440 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 MUM1Q2TAK8 710 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 KLHL38Q2WGJ6 581 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 MAP1SQ66K74 1059 aaPredicted RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 HEXIM2Q96MH2 286 aaKnown RBP16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 SYT15Q9BQS2 421 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 BTBD10Q9BSF8 475 aa16.95■□□□□ 0.3
NKX3-1-201ENST00000380871 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 E7ESA3 106 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 CXCL11O14625 94 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 GYG2O15488 501 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 DLDP09622 509 aaKnown RBP16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 MYL2P10916 166 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 ETV4P43268 484 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms