RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SNX13Q9Y5W8 968 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CCL15-CCL14A0A0B4J2E2 113 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TALDO1P37837 337 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 RAD23AP54725 363 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CCL15Q16663 113 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ZBED8Q8IZ13 594 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 LSM14AQ8ND56 463 aaKnown RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 RNF38Q9H0F5 515 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 MFSD1Q9H3U5 465 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 RPH3AQ9Y2J0 694 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 GUCA1CO95843 209 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 THPOP40225 353 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 FNTAP49354 379 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 WDR93Q6P2C0 686 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ACMSDQ8TDX5 336 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CYP27B1O15528 508 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 FGFR4P22455 802 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ROR1Q01973 937 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 C2CD6Q53TS8 623 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 LRRC17Q8N6Y2 441 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CLHC1Q8NHS4 586 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 NFKBIZQ9BYH8 718 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 SHCBP1LQ9BZQ2 653 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 BARX2Q9UMQ3 279 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ATP10DQ9P241 1426 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 AIM2O14862 343 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 PABPC1P11940 636 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ADSLP30566 484 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CSTF3Q12996 717 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 XRCC4Q13426 336 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ACAP1Q15027 740 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 UBA3Q8TBC4 463 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CPA5Q8WXQ8 436 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 FOXP1Q9H334 677 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 OSGEPL1Q9H4B0 414 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ABCG2Q9UNQ0 655 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 NCF1BA6NI72 391 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 NCF1CA8MVU1 366 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 IRF6O14896 467 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 KCNN4O15554 427 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CLUP10909 449 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 NCF1P14598 390 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 TCN1P20061 433 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ABCE1P61221 599 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ITPRIPL1Q6GPH6 555 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 LLGL2Q6P1M3 1020 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 KBTBD2Q8IY47 623 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 SVOPQ8N4V2 548 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 MAGEB18Q96M61 343 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 EHD3Q9NZN3 535 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 MIF4GDA9UHW6 222 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CYP7B1O75881 506 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 CPA2P48052 419 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 PLCL1Q15111 1095 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 KCNK18Q7Z418 384 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-202ENST00000380833 EPB41L1Q9H4G0 881 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 STON1Q9Y6Q2 735 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
CLCN4-202ENST00000380833 ZBTB5O15062 677 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 NR3C1P04150 777 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 BLMHQ13867 455 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PNPT1Q8TCS8 783 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 YME1L1Q96TA2 773 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SLC9A2Q9UBY0 812 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 VAMP7P51809 220 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 DDX39BQ13838 428 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 NEDD8Q15843 81 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PABPC1LQ4VXU2 614 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms