RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CLEC20AQ6ZU45 233 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 BBS12Q6ZW61 710 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 PRUNE1Q86TP1 453 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 CCDC89Q8N998 374 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 OR2W6PQ8NHA6 318 aa20.77■□□□□ 0.92
PDLIM5-205ENST00000380180 MYBPHLA2RUH7 354 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 CAPN15O75808 1086 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 ATF2P15336 505 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 TFE3P19532 575 aaPredicted RBP20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 KLRC2P26717 231 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 BRCC3P46736 316 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 PMS2P54278 862 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 VCPP55072 806 aaKnown RBP20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 CDH6P55285 790 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 OASLQ15646 514 aaKnown RBP20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 BOLA3Q53S33 107 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 TTMPQ5BVD1 217 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 CD300LGQ6UXG3 332 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 ARCQ7LC44 396 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 SH3TC2Q8TF17 1288 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 PHF24Q9UPV7 400 aa20.77■□□□□ 0.91
PDLIM5-205ENST00000380180 C9IYK1 514 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 DESP17661 470 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 PTPN9P43378 593 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 ARSEP51690 589 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 ITGA8P53708 1063 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 HDAC4P56524 1084 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 OTUD4Q01804 1114 aaKnown RBP20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 ADIGQ0VDE8 80 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 MMRN1Q13201 1228 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 EFHC1Q5JVL4 640 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 SPDYCQ5MJ68 293 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 CEP85LQ5SZL2 805 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 RFX6Q8HWS3 928 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 SLC35B2Q8TB61 432 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 ACTL9Q8TC94 416 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 NDRG1Q92597 394 aaKnown RBP20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 NKD2Q969F2 451 aaPredicted RBP20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 PCED1BQ96HM7 432 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 C11orf84Q9BUA3 381 aaPredicted RBP20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 ADAM33Q9BZ11 813 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 CDH9Q9ULB4 789 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 TRIM17Q9Y577 477 aa20.76■□□□□ 0.91
PDLIM5-205ENST00000380180 KBTBD13C9JR72 458 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 FAM200BP0CF97 657 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 MAP3K7CLP57077 242 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 RHBDF2Q6PJF5 856 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 SLC24A5Q71RS6 500 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 ALLCQ8N6M5 410 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 GLIS1Q8NBF1 620 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 TTC13Q8NBP0 860 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 HASPINQ8TF76 798 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 KCTD13Q8WZ19 329 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 KRT82Q9NSB4 513 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 GOLGA6CA6NDK9 693 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 EOMESO95936 686 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 ITGAVP06756 1048 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 GOLGA6DP0CG33 693 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 ODC1P11926 461 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 DPYSL3Q14195 570 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 MYCBPAPQ8TBZ2 947 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 LINC01599Q8WXQ3 324 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 CENPIQ92674 756 aaPredicted RBP20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 NCAPGQ9BPX3 1015 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 TMEM121Q9BTD3 319 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 DDX23Q9BUQ8 820 aaKnown RBP20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 EPB41L4BQ9H329 900 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 PABPC3Q9H361 631 aaKnown RBP20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 GOLGA6AQ9NYA3 693 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 ANAPC5Q9UJX4 755 aa20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 ZNF638Q14966 1978 aaKnown RBP20.75■□□□□ 0.91
PDLIM5-205ENST00000380180 INPPL1O15357 1258 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 NDUFV1P49821 464 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 ADCY1Q08828 1119 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 ZNF844Q08AG5 666 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 ZC3H12AQ5D1E8 599 aaKnown RBP20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 TEKT4Q8WW24 435 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 UROC1Q96N76 676 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 RTP3Q9BQQ7 232 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 MAK16Q9BXY0 300 aaKnown RBP20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 SEMA4AQ9H3S1 761 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 LRRC4Q9HBW1 653 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 GPATCH2LQ9NWQ4 482 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 PTPRDP23468 1912 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 TET1Q8NFU7 2136 aa20.74■□□□□ 0.91
PDLIM5-205ENST00000380180 ITGB1P05556 798 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 ETS1P14921 441 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 PCSK1P29120 753 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 RABGGTBP53611 331 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 ATXN1P54253 815 aaKnown RBP20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 MRPS5P82675 430 aaKnown RBP20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 SLMAPQ14BN4 828 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 PDK2Q15119 407 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 FAM35AQ86V20 835 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 TBCBQ99426 244 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 SNRNP25Q9BV90 132 aaKnown RBP20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 M0QZQ0 153 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms