RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PSPC1Q8WXF1 523 aaKnown RBP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 PEX13Q92968 403 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 ART4Q93070 314 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CCDC138Q96M89 665 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 DCUN1D5Q9BTE7 237 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CALN1Q9BXU9 219 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TRIM55Q9BYV6 548 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 SHCBP1LQ9BZQ2 653 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 C17orf75Q9HAS0 396 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 COMMD8Q9NX08 183 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TBC1D14Q9P2M4 693 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 GNPTGQ9UJJ9 305 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 NAALADL1Q9UQQ1 740 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 ACTL7BQ9Y614 415 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 PSMD11O00231 422 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 NAGAP17050 411 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 IST1P53990 364 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 ARID5AQ03989 594 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CHRNEQ04844 493 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 LRRC63Q05C16 580 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 HSPA14Q0VDF9 509 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 SPARCL1Q14515 664 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 IL17AQ16552 155 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CCDC14Q49A88 953 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CEP78Q5JTW2 689 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TBC1D15Q8TC07 691 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CHURC1Q8WUH1 139 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 SYN2Q92777 582 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 PSKH2Q96QS6 385 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CSRNP1Q96S65 589 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 OLFM1Q99784 485 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 THTPAQ9BU02 230 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 BMP2KQ9NSY1 1161 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 NDFIP2Q9NV92 336 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 A0A0G2JND7 137 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 J3QRK9 145 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 NMT2O60551 498 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A9O60656 530 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 NOL4O94818 638 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 FOSL1P15407 271 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF23P17027 643 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A6P19224 532 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A1P22309 533 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A4P22310 534 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A3P35503 534 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A5P35504 534 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ADCY8P40145 1251 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ALDH3B2P48448 385 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ARHGAP4P98171 946 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 OVGP1Q12889 678 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 SELENBP1Q13228 472 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 GRAMD1BQ3KR37 738 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 XKR5Q6UX68 686 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 GSTCDQ8NEC7 633 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ATP2A3Q93084 1043 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 FBXL8Q96CD0 374 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 CNBD2Q96M20 576 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 GMLQ99445 158 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 PSD2Q9BQI7 771 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A7Q9HAW7 530 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A10Q9HAW8 530 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 UGT1A8Q9HAW9 530 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 C12orf10Q9HB07 376 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 EBF1Q9UH73 591 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 PADI4Q9UM07 663 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ERGIC3Q9Y282 383 aa7.77□□□□□ -1.16
CDKL5-201ENST00000379989 ATF5Q9Y2D1 282 aaPredicted RBP7.77□□□□□ -1.16
CDKL5-201ENST00000379989 CASQ2O14958 399 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-201ENST00000379989 PEX1O43933 1283 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ESRRBO95718 433 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CCDC159P0C7I6 412 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 SRGAP2CP0DJJ0 459 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 SRGAP2BP0DMP2 458 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 PRKCAP17252 672 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CTRB1P17538 263 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 MCM7P33993 719 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 STAT2P52630 851 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF135P52742 658 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-201ENST00000379989 PEX3P56589 373 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CTBSQ01459 385 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 COL19A1Q14993 1142 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 MAN2A1Q16706 1144 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 FAM83BQ5T0W9 1011 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CTRB2Q6GPI1 263 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
CDKL5-201ENST00000379989 SLC51BQ86UW2 128 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ANKRD35Q8N283 1001 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 TOR1AIP2Q8NFQ8 470 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 RAB3IL1Q8TBN0 382 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 DPF3Q92784 378 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 RBM15Q96T37 977 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDKL5-201ENST00000379989 ARMCX1Q9P291 453 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 HMGXB4Q9UGU5 601 aa7.77□□□□□ -1.17
CDKL5-201ENST00000379989 CORINQ9Y5Q5 1042 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms