RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 MAT2AP31153 395 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PURAQ00577 322 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CFAP221Q4G0U5 840 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SH3D19Q5HYK7 790 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 UNC45BQ8IWX7 931 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 IL22RA1Q8N6P7 574 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 IL31RAQ8NI17 732 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 EDEM1Q92611 657 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 B3GALT6Q96L58 329 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 IL17RBQ9NRM6 502 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SLC30A1Q9Y6M5 507 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CAPN6Q9Y6Q1 641 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PTPRJQ12913 1337 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KLRG2A4D1S0 409 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 RCCD1A6NED2 376 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NDUFB5O43674 189 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TCP1P17987 556 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 GJA5P36382 358 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PBX1P40424 430 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NRLP54845 237 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 OXCT1P55809 520 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PPP2R5EQ16537 467 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SNRNP35Q16560 246 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 GOLGA7BQ2TAP0 167 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 EPC2Q52LR7 807 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 FAM133BQ5BKY9 247 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NAA35Q5VZE5 725 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TTI2Q6NXR4 508 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PTAR1Q7Z6K3 402 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TBC1D1Q86TI0 1168 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF557Q8N988 423 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KCNV2Q8TDN2 545 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CINPQ9BW66 212 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SFXN1Q9H9B4 322 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TBC1D14Q9P2M4 693 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ADAMTS1Q9UHI8 967 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 DNAJC12Q9UKB3 198 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NFU1Q9UMS0 254 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 REXO2Q9Y3B8 237 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PCK1P35558 622 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CXCL12P48061 93 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 WASHC5Q12768 1159 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 FAXCQ5TGI0 409 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 WSCD1Q658N2 575 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 PLPPR4Q7Z2D5 763 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 TRAPPC11Q7Z392 1133 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CAPN10Q9HC96 672 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SCN11AQ9UI33 1791 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 N4BP2Q86UW6 1770 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 KPNA7A9QM74 516 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SLC31A1O15431 190 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CYTH3O43739 400 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 KRT1P04264 644 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 MCF2P10911 925 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 MYOGP15173 224 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 NPTX2P47972 431 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SCNN1BP51168 640 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CSE1LP55060 971 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 RPL6Q02878 288 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 STILQ15468 1287 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 NPY5RQ15761 445 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 NAALADL2Q58DX5 795 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CFAP157Q5JU67 520 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 C9orf50Q5SZB4 431 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 C6orf132Q5T0Z8 1188 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 IRF2BP1Q8IU81 584 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 IFT20Q8IY31 132 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF384Q8TF68 577 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 NAF1Q96HR8 494 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 C12orf42Q96LP6 360 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 OSBPL9Q96SU4 736 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CCSER1Q9C0I3 900 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ELOVL4Q9GZR5 314 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 NXF3Q9H4D5 531 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 DMAP1Q9NPF5 467 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 GKN1Q9NS71 199 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ASNSD1Q9NWL6 643 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ALKBH4Q9NXW9 302 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 H0Y858 1186 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 MAPK13O15264 365 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 EIF3DO15371 548 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ATP9AO75110 1047 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 GATMP50440 423 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 COASYQ13057 564 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ACOX1Q15067 660 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 TOMM20Q15388 145 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 DARS2Q6PI48 645 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 DNAAF5Q86Y56 855 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC105Q8IYK2 499 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 GUF1Q8N442 669 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 CXorf40AQ8TE69 158 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 HDAC7Q8WUI4 952 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 HNRNPLLQ8WVV9 542 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 KIAA1143Q96AT1 154 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SCYL1Q96KG9 808 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms