RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SLC4A5Q9BY07 1137 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 LRRC4Q9HBW1 653 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 CYLDQ9NQC7 956 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 AIPL1Q9NZN9 384 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 GMIPQ9P107 970 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 CYTH4Q9UIA0 394 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 GREB1Q4ZG55 1949 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 FERP16591 822 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
SSU72-203ENST00000378725 PGFP49763 221 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 CDR2Q01850 454 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 HTR4Q13639 388 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 PARM1Q6UWI2 310 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 MTSS1LQ765P7 747 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 TMEM110Q86TL2 294 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 CMTM8Q8IZV2 173 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 MAB21L3Q8N8X9 362 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 KCNK12Q9HB15 430 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 TLR8Q9NR97 1041 aaKnown RBP19.73■□□□□ 0.75
SSU72-203ENST00000378725 IGSF9Q9P2J2 1179 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 CAPN11Q9UMQ6 739 aa19.73■□□□□ 0.75
SSU72-203ENST00000378725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■□□□□ 8.8
SSU72-203ENST00000378725 C2orf78A6NCI8 922 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 LRRC53A6NM62 1247 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 ZBED1O96006 694 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 OAS1P00973 400 aaKnown RBP19.72■□□□□ 0.75
SSU72-203ENST00000378725 MMEP08473 750 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 USP17L7P0C7H9 530 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 CCDC172P0C7W6 258 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 CHRNB2P17787 502 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 FCARP24071 287 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 ACADSBP45954 432 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 RGS7P49802 495 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 TUBP50607 506 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 SPECC1LQ69YQ0 1117 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 BHLHA9Q7RTU4 235 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 SCD5Q86SK9 330 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 RNF135Q8IUD6 432 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 ARID3BQ8IVW6 561 aaPredicted RBP19.72■□□□□ 0.75
SSU72-203ENST00000378725 VSTM4Q8IW00 320 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 ZNF276Q8N554 614 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 FGF14Q92915 247 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 ULBP1Q9BZM6 244 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 SLITRK6Q9H5Y7 841 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 CNGB3Q9NQW8 809 aa19.72■□□□□ 0.75
SSU72-203ENST00000378725 TCF20Q9UGU0 1960 aaKnown RBP19.72■□□□□ 0.75
SSU72-203ENST00000378725 ECI2O75521 394 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 OLFM2O95897 454 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 PSEN1P49768 467 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 FMO1Q01740 532 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 ADIGQ0VDE8 80 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 TAF3Q5VWG9 929 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 TANGO2Q6ICL3 276 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 PASD1Q8IV76 773 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 TMEM35BQ8NCS4 154 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 SLC20A1Q8WUM9 679 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 SYN2Q92777 582 aaPredicted RBP19.71■□□□□ 0.75
SSU72-203ENST00000378725 ELSPBP1Q96BH3 223 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 SLC22A12Q96S37 553 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 CYP2S1Q96SQ9 504 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 TRIM5Q9C035 493 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 NUCKS1Q9H1E3 243 aaKnown RBP19.71■□□□□ 0.75
SSU72-203ENST00000378725 NMUR1Q9HB89 426 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 ZFP14Q9HCL3 533 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 OSER1Q9NX31 292 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 NUMBLQ9Y6R0 609 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 PATJQ8NI35 1801 aa19.71■□□□□ 0.75
SSU72-203ENST00000378725 TRAV19A0A0A6YYK7 116 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 A0A1W2PQH9 124 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 FBXO21O94952 628 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 LSM8O95777 96 aaKnown RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 ABL1P00519 1130 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 GYPCP04921 128 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 LCP1P13796 627 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 HDCP19113 662 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 ZBED6P86452 979 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 ARID5AQ03989 594 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 PDCLQ13371 301 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 ZNF268Q14587 947 aaPredicted RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 HECTD3Q5T447 861 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 SFMBT2Q5VUG0 894 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 GPIHBP1Q8IV16 184 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 SIX6OS1Q8N1H7 587 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 ARHGAP18Q8N392 663 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 SLC44A3Q8N4M1 653 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 ARL14EPQ8N8R7 260 aaPredicted RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 C1orf131Q8NDD1 294 aaKnown RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 ZNF397Q8NF99 534 aaPredicted RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 RSAD2Q8WXG1 361 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 IRGQQ8WZA9 623 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 NDRG1Q92597 394 aaKnown RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 E2F7Q96AV8 911 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 RPP25Q9BUL9 199 aaKnown RBP19.7■□□□□ 0.74
SSU72-203ENST00000378725 RNF38Q9H0F5 515 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 PDCL3Q9H2J4 239 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 TRPC7Q9HCX4 862 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 OBP2AQ9NY56 170 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 CLIC5Q9NZA1 410 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 CEP83Q9Y592 693 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms