RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 GJD4Q96KN9 370 aaPredicted RBP15.43■□□□□ 0.06
EXT1-201ENST00000378204 CEP44Q9C0F1 390 aa15.43■□□□□ 0.06
EXT1-201ENST00000378204 WBP11Q9Y2W2 641 aaKnown RBP15.43■□□□□ 0.06
EXT1-201ENST00000378204 PNPLA6Q8IY17 1366 aa15.43■□□□□ 0.06
EXT1-201ENST00000378204 SAC3D1A6NKF1 404 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 S100A6P06703 90 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 CYP2C9P11712 490 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 EPHB2P29323 1055 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 CHRNA5P30532 468 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 PLOD1Q02809 727 aaPredicted RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 KHDRBS2Q5VWX1 349 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 AGPAT3Q9NRZ7 376 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
EXT1-201ENST00000378204 LRCH1Q9Y2L9 728 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 C2orf81A6NN90 581 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 PSMA4P25789 261 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 ATXN3P54252 364 aaPredicted RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 SDE2Q6IQ49 451 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 CHSY1Q86X52 802 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 AGBL1Q96MI9 1066 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 ARHGEF3Q9NR81 526 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 FAM153AQ9UHL3 310 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 DSEQ9UL01 958 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 KCNQ2O43526 872 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 PDE9AO76083 593 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 DNAJC3Q13217 504 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 PAIP1Q9H074 479 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 CACNA2D1P54289 1103 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 IKBIPQ70UQ0 350 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 RSPH1Q8WYR4 309 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 FAM118BQ9BPY3 351 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 NOL6Q9H6R4 1146 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 JMJD4Q9H9V9 463 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 GTF3C4Q9UKN8 822 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 CUL2Q13617 745 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 C10orf120Q5SQS8 335 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 NARS2Q96I59 477 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 FAR2Q96K12 515 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 PABPC3Q9H361 631 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 ZSCAN32Q9NX65 697 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 TRMT6Q9UJA5 497 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 HEATR9A2RTY3 570 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 SOAT1P35610 550 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 HIST2H2ACQ16777 129 aaPredicted RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 PCNX4Q63HM2 1172 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 HIST2H2AA3Q6FI13 130 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 UNC45BQ8IWX7 931 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 LBHD1Q9BQE6 289 aaPredicted RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 PCDHB7Q9Y5E2 793 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 RPS6KL1Q9Y6S9 549 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 NQO1P15559 274 aaKnown RBP15.42■□□□□ 0.06
EXT1-201ENST00000378204 CLEC10AQ8IUN9 316 aa15.42■□□□□ 0.06
EXT1-201ENST00000378204 ITGB3P05106 788 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ZCCHC18P0CG32 403 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 HSD17B3P37058 310 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 SLC13A5Q86YT5 568 aaPredicted RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 CSF1RP07333 972 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 IRF1P10914 325 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 TAF6P49848 677 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 MTM1Q13496 603 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 MRNIPQ6NTE8 343 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ZNF554Q86TJ5 538 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 USE1Q9NZ43 259 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 E9PCH4 1651 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 E2F8A0AVK6 867 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 PMPCBO75439 489 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ODC1P11926 461 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 PSMC3P17980 439 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 PSMA3P25788 255 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 EGFL6Q8IUX8 553 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 NOA1Q8NC60 698 aaKnown RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 EXOSC4Q9NPD3 245 aaKnown RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 ADGRB3O60242 1522 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 MLNP12872 115 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 FAM45BPQ6NSW5 357 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 CCNJLQ8IV13 435 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 AAR2Q9Y312 384 aaKnown RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 NUMA1Q14980 2115 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 UPP2O95045 317 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 KIF2BQ8N4N8 673 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ATP6V0D2Q8N8Y2 350 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
EXT1-201ENST00000378204 WHRNQ9P202 907 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 CRLS1Q9UJA2 301 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 TRIM49D1C9J1S8 452 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 CYTH3O43739 400 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 BCL10O95999 233 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 ITIH4Q14624 930 aa15.41■□□□□ 0.06
EXT1-201ENST00000378204 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms