RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PPP1R36Q96LQ0 422 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 DACH2Q96NX9 599 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ASB7Q9H672 318 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ENO4A6NNW6 628 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 SPATA31C1P0DKV0 1188 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 KCNA3P22001 575 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 SKOR1P84550 965 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 GCNT1Q02742 428 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TDRD10Q5VZ19 366 aaKnown RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 EFHBQ8N7U6 833 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF606Q8WXB4 792 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 C20orf96Q9NUD7 363 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 SLC13A4Q9UKG4 626 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TRIM49D1C9J1S8 452 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 H0Y626 953 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TRIM16O95361 564 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TRPC1P48995 793 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PDK2Q15119 407 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 MROH9Q5TGP6 573 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TTC30AQ86WT1 665 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 FBXO36Q8NEA4 188 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 IKZF4Q9H2S9 585 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PALMDQ9NP74 551 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PCDHA3Q9Y5H8 950 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PPP1R11O60927 126 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 NDUFS3O75489 264 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 MCL1Q07820 350 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 DAB2IPQ5VWQ8 1189 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 IRF2BP2Q7Z5L9 587 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 ETNPPLQ8TBG4 499 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 FAM172AQ8WUF8 416 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TSPAN17Q96FV3 270 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PAWRQ96IZ0 340 aaKnown RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 FAM111AQ96PZ2 611 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 SH3BP1Q9Y3L3 701 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 hCG_2014768A0A024R1R8 64 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 CALCAP01258 141 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 CPA2P48052 419 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ITIH4Q14624 930 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 SHROOM1Q2M3G4 852 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ZBTB41Q5SVQ8 909 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 LRRC8BQ6P9F7 803 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 SPOCD1Q6ZMY3 1216 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DNAJB3Q8WWF6 145 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 MRGBPQ9NV56 204 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 SNTG2Q9NY99 539 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 LTN1O94822 1766 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 C2CD2LO14523 706 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 TLR2O60603 784 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ST8SIA6P61647 398 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 TRADDQ15628 312 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 TMEM154Q6P9G4 183 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 RIOX2Q8IUF8 465 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 KIRREL3Q8IZU9 778 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 CALML6Q8TD86 181 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DCUN1D1Q96GG9 259 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 KCNK16Q96T55 309 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 PKD2L2Q9NZM6 624 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ITGA11Q9UKX5 1188 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 NAALADL1Q9UQQ1 740 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 TMEM247A6NEH6 219 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ESRRBO95718 433 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 IRF1P10914 325 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 HADHAP40939 763 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
NPHP4-201ENST00000378156 BRSK2Q8IWQ3 736 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DDIASQ8IXT1 998 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 KIAA2013Q8IYS2 634 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 EPS8L1Q8TE68 723 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DCLK3Q9C098 648 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DNAJC18Q9H819 358 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 RRAGCQ9HB90 399 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 CYP39A1Q9NYL5 469 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 DCDC2CA8MYV0 355 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 STK25O00506 426 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF197O14709 1029 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 UBOX5O94941 541 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 LHX1P48742 406 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 MAP3K10Q02779 954 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 TWF1Q12792 350 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 YAF2Q8IY57 180 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 SLC25A41Q8N5S1 370 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ATP6V0D2Q8N8Y2 350 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF384Q8TF68 577 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 PBXIP1Q96AQ6 731 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 INPP4AQ96PE3 977 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-201ENST00000378156 ASPSCR1Q9BZE9 553 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
NPHP4-201ENST00000378156 IRF6O14896 467 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 ANP32DO95626 131 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 BFSP2Q13515 415 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 CRYMQ14894 314 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms