RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 POTEHQ6S545 545 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 CMTM8Q8IZV2 173 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 ARHGAP18Q8N392 663 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
CKAP2-202ENST00000378034 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 TRAV19A0A0A6YYK7 116 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 AVPR1AP37288 418 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ACADSBP45954 432 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 RPL34P49207 117 aaKnown RBP13.94□□□□□ -0.18
CKAP2-202ENST00000378034 TKTL1P51854 596 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ZNF268Q14587 947 aaPredicted RBP13.94□□□□□ -0.18
CKAP2-202ENST00000378034 PTPN21Q16825 1174 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 PM20D1Q6GTS8 502 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 PARM1Q6UWI2 310 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ARID3BQ8IVW6 561 aaPredicted RBP13.94□□□□□ -0.18
CKAP2-202ENST00000378034 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 KIF9Q9HAQ2 790 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 SORCS3Q9UPU3 1222 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 NUMBLQ9Y6R0 609 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 MYO16Q9Y6X6 1858 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 TULP2O00295 520 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 GFPT2O94808 682 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ZBED1O96006 694 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 FCARP24071 287 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 TDGQ13569 410 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 HECTD3Q5T447 861 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ZNF276Q8N554 614 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 FGF14Q92915 247 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 XPO4Q9C0E2 1151 aaKnown RBP13.94□□□□□ -0.18
CKAP2-202ENST00000378034 GMIPQ9P107 970 aa13.94□□□□□ -0.18
CKAP2-202ENST00000378034 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
CKAP2-202ENST00000378034 ITIH6Q6UXX5 1313 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 FBXO21O94952 628 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 OLFM2O95897 454 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
CKAP2-202ENST00000378034 FERP16591 822 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 HDCP19113 662 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 SNX16P57768 344 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 TANGO2Q6ICL3 276 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 PIAS4Q8N2W9 510 aaPredicted RBP13.93□□□□□ -0.18
CKAP2-202ENST00000378034 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 CELF5Q8N6W0 485 aaKnown RBP13.93□□□□□ -0.18
CKAP2-202ENST00000378034 EPS8L1Q8TE68 723 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 DEPDC1BQ8WUY9 529 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 DDX1Q92499 740 aaKnown RBP13.93□□□□□ -0.18
CKAP2-202ENST00000378034 BAP1Q92560 729 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 CDK5RAP1Q96SZ6 601 aaKnown RBP13.93□□□□□ -0.18
CKAP2-202ENST00000378034 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 TTYH3Q9C0H2 523 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
CKAP2-202ENST00000378034 C2orf78A6NCI8 922 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 DPYSL4O14531 572 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 LSM8O95777 96 aaKnown RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ABL1P00519 1130 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ASGR2P07307 311 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ALADP13716 330 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 CDH5P33151 784 aaPredicted RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ADIGQ0VDE8 80 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ULBP1Q9BZM6 244 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 NUCKS1Q9H1E3 243 aaKnown RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 PDCL3Q9H2J4 239 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 TDP1Q9NUW8 608 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 SART1O43290 800 aaKnown RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 CKMP06732 381 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 CFHP08603 1231 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 TCF3P15923 654 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 RGS7P49802 495 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 SLC7A9P82251 487 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 CDR2Q01850 454 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 TMEM110Q86TL2 294 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 MFSD6LQ8IWD5 586 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 KIAA1958Q8N8K9 716 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 RSAD2Q8WXG1 361 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 KXD1Q9BQD3 176 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 MUTYHQ9UIF7 546 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 NOCTQ9UK39 431 aaKnown RBP13.92□□□□□ -0.18
CKAP2-202ENST00000378034 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.182e-7■□□□□ 11.3
CKAP2-202ENST00000378034 MYO10Q9HD67 2058 aa13.92□□□□□ -0.18
CKAP2-202ENST00000378034 A0A1W2PQH9 124 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 HEPACAM2A8MVW5 462 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms