RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 BAG2O95816 211 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 ERBB2P04626 1255 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 KRT7P08729 469 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 EIF4BP23588 611 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 IRX4P78413 519 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 CHI3L2Q15782 390 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 AP1ARQ63HQ0 302 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 CWF19L1Q69YN2 538 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 PPFIBP2Q8ND30 876 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 AKT1S1Q96B36 256 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 FAF2Q96CS3 445 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 PEBP4Q96S96 227 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 ZNF184Q99676 751 aaPredicted RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 EBF4Q9BQW3 602 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 PLAC1Q9HBJ0 212 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
GNE-201ENST00000377902 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
GNE-201ENST00000377902 H0YCG3 227 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 MCF2LO15068 1137 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 C1QAP02745 245 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 NAMPTP43490 491 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 AQP5P55064 265 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 UBAP2LQ14157 1087 aaKnown RBP18.75■□□□□ 0.59
GNE-201ENST00000377902 SNRNP48Q6IEG0 339 aaKnown RBP18.75■□□□□ 0.59
GNE-201ENST00000377902 TTC13Q8NBP0 860 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 CCDC110Q8TBZ0 833 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 LPAR1Q92633 364 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 PHACTR1Q9C0D0 580 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 NIF3L1Q9GZT8 377 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 RAB6BQ9NRW1 208 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 APOC4-APOC2K7ER74 178 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 SNUPNO95149 360 aaKnown RBP18.75■□□□□ 0.59
GNE-201ENST00000377902 APOC2P02655 101 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 CALRP27797 417 aaKnown RBP18.75■□□□□ 0.59
GNE-201ENST00000377902 ARL2P36404 184 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 CAPSQ13938 189 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 HADHQ16836 314 aaKnown RBP18.75■□□□□ 0.59
GNE-201ENST00000377902 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
GNE-201ENST00000377902 PRR5-ARHGAP8B1AHC4 643 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 LGR5O75473 907 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 PIGRP01833 764 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 SUPT20HL2P0C7V6 817 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 ANPEPP15144 967 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 ASPAP45381 313 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 RAB27AP51159 221 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 ARHGAP8P85298 464 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 TAP1Q03518 808 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 KCNJ11Q14654 390 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 SUPT20HL1Q3ZLR7 823 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 IZUMO2Q6UXV1 221 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 SCUBE1Q8IWY4 988 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 CFAP61Q8NHU2 1237 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 ASCC2Q9H1I8 757 aaPredicted RBP18.74■□□□□ 0.59
GNE-201ENST00000377902 MMADHCQ9H3L0 296 aaPredicted RBP18.74■□□□□ 0.59
GNE-201ENST00000377902 DHX33Q9H6R0 707 aaKnown RBP18.74■□□□□ 0.59
GNE-201ENST00000377902 ZNF212Q9UDV6 495 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 SLC7A8Q9UHI5 535 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 PPM1HQ9ULR3 514 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 FZD1Q9UP38 647 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 PLA2G4CQ9UP65 541 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 PLLPQ9Y342 182 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 WNT10BO00744 389 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 NDC80O14777 642 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 FAM189A1O60320 539 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 TRPC3Q13507 836 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 TAZQ16635 292 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 LRRC36Q1X8D7 754 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 DPH6Q7L8W6 267 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 TMPRSS6Q8IU80 811 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 ULK2Q8IYT8 1036 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 GALNT15Q8N3T1 639 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 E2F7Q96AV8 911 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 MMP19Q99542 508 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 HMGXB4Q9UGU5 601 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 USP18Q9UMW8 372 aa18.74■□□□□ 0.59
GNE-201ENST00000377902 A0A1B0GVG6 124 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 DKC1O60832 514 aaKnown RBP eCLIP18.73■□□□□ 0.59
GNE-201ENST00000377902 SORBS2O94875 1100 aaKnown RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 CDH5P33151 784 aaPredicted RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 RAP1GDS1P52306 607 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 YWHAZP63104 245 aaKnown RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 ROR1Q01973 937 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 SLC26A11Q86WA9 606 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 XYLT1Q86Y38 959 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 BRSK2Q8IWQ3 736 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 CCDC33Q8N5R6 958 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 NSUN6Q8TEA1 469 aaKnown RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 SLC7A3Q8WY07 619 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 ZNF518BQ9C0D4 1074 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 ZNF302Q9NR11 478 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 PCDHGC3Q9UN70 934 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 EFR3BQ9Y2G0 817 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 H7C0C1 242 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 RFPL1O75677 317 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 OATP04181 439 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 ATP5OP48047 213 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms