RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GRTP1Q5TC63 336 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ATF7IP2Q5U623 682 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ARCQ7LC44 396 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 DEFB107AQ8IZN7 70 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KYQ8NBH2 561 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CALML6Q8TD86 181 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KIF12Q96FN5 646 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PLEKHA5Q9HAU0 1116 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 UMODL1Q5DID0 1318 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ALOX15BO15296 676 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 E2F6O75461 281 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PSMD10O75832 226 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 LCP1P13796 627 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 EFL1Q7Z2Z2 1120 aaKnown RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PHF13Q86YI8 300 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TDRD5Q8NAT2 981 aaKnown RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 FAM13CQ8NE31 585 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ASAP3Q8TDY4 903 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CYGBQ8WWM9 190 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ELMO2Q96JJ3 720 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TCEA3O75764 348 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TGDSO95455 350 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 APOC2P02655 101 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 MYL4P12829 197 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SSTR1P30872 391 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ECHDC2Q86YB7 292 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PRDM16Q9HAZ2 1276 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 AGAP1Q9UPQ3 857 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TMX2Q9Y320 296 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 OGTO15294 1046 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KRT36O76013 467 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CPA3P15088 417 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 MAMLD1Q13495 774 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 BAATQ14032 418 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 DHDDSQ86SQ9 333 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 NCLNQ969V3 563 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SH2D3AQ9BRG2 576 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CAAP1Q9H8G2 361 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 C10orf88Q9H8K7 445 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ZDHHC18Q9NUE0 388 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ZNF70Q9UC06 446 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ANKRD6Q9Y2G4 727 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 AP1G2O75843 785 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SPATA31C1P0DKV0 1188 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PSMA4P25789 261 aaKnown RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SERPINB5P36952 375 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PRAMEP78395 509 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PLOD1Q02809 727 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 OASLQ15646 514 aaKnown RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 NAPEPLDQ6IQ20 393 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 CATSPER4Q7RTX7 472 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 DDIASQ8IXT1 998 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 RNF139Q8WU17 664 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TAAR1Q96RJ0 339 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 LRRC40Q9H9A6 602 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 ARHGEF38Q9NXL2 777 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 C4AP0C0L4 1744 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SMIM22K7EJ46 135 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TGFB1I1O43294 461 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SERPINA6P08185 405 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 FCGR1AP12314 374 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PGAM1P18669 254 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 ATICP31939 592 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 HK2P52789 917 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 DLG4P78352 724 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TRPC4APQ8TEL6 797 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PTPRN2Q92932 1015 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PPP1R36Q96LQ0 422 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TBCBQ99426 244 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 CYP3A43Q9HB55 503 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 GRHL1Q9NZI5 618 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 KANSL1LA0AUZ9 987 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 ENTPD5O75356 428 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SEC24DO94855 1032 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 MMP10P09238 476 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 CDC25CP30307 473 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 HMOX2P30519 316 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 MGAT5Q09328 741 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 NME3Q13232 169 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 DPYSL3Q14195 570 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 POLLQ9UGP5 575 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 M0R2N6 131 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 CCNB1P14635 433 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 INPP1P49441 399 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms