RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ASAH2Q9NR71 780 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 AASDHPPTQ9NRN7 309 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 DLGAP2Q9P1A6 1054 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 TBX20Q9UMR3 447 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 RHOCP08134 193 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 ERAP2Q6P179 960 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 RRM2BQ7LG56 351 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-205ENST00000377670 ZIM3Q96PE6 472 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 STK33Q9BYT3 514 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 ADCY6O43306 1168 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 PEX10O60683 326 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 KRT4P19013 534 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.62
HIF3A-205ENST00000377670 RNF135Q8IUD6 432 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 UBA3Q8TBC4 463 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 SNRNP27Q8WVK2 155 aaKnown RBP11.21□□□□□ -0.62
HIF3A-205ENST00000377670 OTUB1Q96FW1 271 aaPredicted RBP11.21□□□□□ -0.62
HIF3A-205ENST00000377670 IDI2Q9BXS1 227 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 TRABDQ9H4I3 376 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.62
HIF3A-205ENST00000377670 GJB1P08034 283 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 PRKAA1Q13131 559 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.62
HIF3A-205ENST00000377670 ATP8B4Q8TF62 1192 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 RFFLQ8WZ73 363 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 ERP27Q96DN0 273 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 BRD9Q9H8M2 597 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 KIF17Q9P2E2 1029 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 RPTORQ8N122 1335 aa11.21□□□□□ -0.62
HIF3A-205ENST00000377670 TISP43B9A030 160 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ZBTB48P10074 688 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 NPTX2P47972 431 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AAK1Q2M2I8 961 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PABPC1LQ4VXU2 614 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ZRANB3Q5FWF4 1079 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PLPP4Q5VZY2 271 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 C11orf96Q7Z7L8 435 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 TMEM117Q9H0C3 514 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 NOD2Q9HC29 1040 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SLC16A3O15427 465 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SLC26A4O43511 780 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 TLR2O60603 784 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 H2AFYO75367 372 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AKAP3O75969 853 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 EDRF1Q3B7T1 1238 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 RBBP8NLQ8NC74 664 aaPredicted RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PACSIN1Q9BY11 444 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 WWP1Q9H0M0 922 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 C17orf75Q9HAS0 396 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SMPD4Q9NXE4 827 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AURKCQ9UQB9 309 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CXCL14O95715 111 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AXLP30530 894 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 RGS4P49798 205 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SKOR1P84550 965 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PGM5Q15124 567 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 OTOP2Q7RTS6 562 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ZBTB10Q96DT7 871 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 WNT8AQ9H1J5 351 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 RBM12Q9NTZ6 932 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SATB2Q9UPW6 733 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 GAKO14976 1311 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 OGTO15294 1046 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 NAMPTP43490 491 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ATP11CQ8NB49 1132 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CATSPER1Q8NEC5 780 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 WDCPQ9H6R7 721 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 NDOR1Q9UHB4 597 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 A0A087X0T9 212 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ENDOD1O94919 500 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 ATP5BP06576 529 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 FAM228BP0C875 321 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 PLA2G4AP47712 749 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 TMED10P49755 219 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SMTNL2Q2TAL5 461 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 FBXL16Q8N461 479 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 SNX31Q8N9S9 440 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 REPS2Q8NFH8 660 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 RIPOR3Q96MK2 946 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CAPN10Q9HC96 672 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 AGO4Q9HCK5 861 aaKnown RBP11.2□□□□□ -0.62
HIF3A-205ENST00000377670 TBC1D23Q9NUY8 699 aa11.2□□□□□ -0.62
HIF3A-205ENST00000377670 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms