RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 ESPNB1AK53 854 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 TNFRSF10BO14763 440 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 FBXO21O94952 628 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 ZBED1O96006 694 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 KRT3P12035 628 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 CLCN4P51793 760 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 TWF1Q12792 350 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 TAF12Q16514 161 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 OLFML1Q6UWY5 402 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 ZNF662Q6ZS27 426 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 ADGRD2Q7Z7M1 963 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 FAM149B1Q96BN6 582 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 MCRS1Q96EZ8 462 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 CNGB3Q9NQW8 809 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 FBXW11Q9UKB1 542 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 MAFFQ9ULX9 164 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
CBWD3-203ENST00000377344 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 MRPS5P82675 430 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 MTMR3Q13615 1198 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 VEPH1Q14D04 833 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 TAF5Q15542 800 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 IFI16Q16666 785 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 LILRA6Q6PI73 481 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 CCDC149Q6ZUS6 474 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 FEZF2Q8TBJ5 459 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 IRX2Q9BZI1 471 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 TLE6Q9H808 572 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 ANAPC7Q9UJX3 599 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 COL4A4P53420 1690 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 PLXNA3P51805 1871 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 SIGLEC16A6NMB1 481 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 KIF5CO60282 957 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 LRG1P02750 347 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 C8AP07357 584 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 NRIP1P48552 1158 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 EPHB3P54753 998 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 GSCP56915 257 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 RPL7AP62424 266 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 EMC1Q8N766 993 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 GOLGA1Q92805 767 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 MRPL38Q96DV4 380 aaKnown RBP13.6□□□□□ -0.23
CBWD3-203ENST00000377344 BTBD6Q96KE9 485 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 TRIM7Q9C029 511 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 MAN1C1Q9NR34 630 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
CBWD3-203ENST00000377344 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 TCRBV5S1A1TA0A578 114 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 SART1O43290 800 aaKnown RBP13.59□□□□□ -0.23
CBWD3-203ENST00000377344 EPCAMP16422 314 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 YWHAQP27348 245 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 RFC1P35251 1148 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-203ENST00000377344 DAOAP59103 153 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 USP46P62068 366 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 PLD1Q13393 1074 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 MESDQ14696 234 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 EFHC1Q5JVL4 640 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 JOSD2Q8TAC2 188 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-203ENST00000377344 ALS2CR12Q96Q35 445 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 CAPN6Q9Y6Q1 641 aa13.59□□□□□ -0.23
CBWD3-203ENST00000377344 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 E7ENQ6 273 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 MYO1FO00160 1098 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 CSH1P0DML2 217 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 CSH2P0DML3 217 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PPM1LQ5SGD2 360 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PPP1R15BQ5SWA1 713 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 HFE2Q6ZVN8 426 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 SLC26A9Q7LBE3 791 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 TPCN2Q8NHX9 752 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 FBXO32Q969P5 355 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 PLEKHA4Q9H4M7 779 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 IGFLR1Q9H665 355 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 TRANK1O15050 2925 aa13.58□□□□□ -0.24
CBWD3-203ENST00000377344 TMEM191CA6NGB0 347 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 CAPN9O14815 690 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 HSF2BPO75031 334 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 PALMO75781 387 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 LTFP02788 710 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 PDGFRAP16234 1089 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 GNG11P61952 73 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 ELMOD1Q8N336 334 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms