RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 TBX20Q9UMR3 447 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 GPR75-ASB3A0A0A6YYF3 556 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PEX1O43933 1283 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PIAS1O75925 651 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NDUFB10O96000 172 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 MUTP22033 750 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SREBF1P36956 1147 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 WDR4P57081 412 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 N4BP2L1Q5TBK1 243 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 CYP4A22Q5TCH4 519 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DLG3Q92796 817 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PPP1R14BQ96C90 147 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 CLPTM1LQ96KA5 538 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 LRRC4CQ9HCJ2 640 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ACP6Q9NPH0 428 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SLC17A7Q9P2U7 560 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 LNPEPQ9UIQ6 1025 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DRG1Q9Y295 367 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PCDHA10Q9Y5I2 948 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ASTN1O14525 1302 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 FRMPD4Q14CM0 1322 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TMEM94Q12767 1356 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 IFT172Q9UG01 1749 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TRPC5OSA6NMA1 111 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 MAP3K13O43283 966 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ETS1P14921 441 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PSMA4P25789 261 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 GPC3P51654 580 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 HIRAP54198 1017 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DAB2P98082 770 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PRKG1Q13976 671 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 LPIN1Q14693 890 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 HABP4Q5JVS0 413 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SWSAP1Q6NVH7 229 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 RINLQ6ZS11 566 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DACT3Q96B18 629 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 HBS1LQ9Y450 684 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PRR5-ARHGAP8B1AHC4 643 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TGDSO95455 350 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 SERPINB2P05120 415 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 APOA4P06727 396 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 IGBP1P78318 339 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ARHGAP8P85298 464 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DMPKQ09013 629 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NRF1Q16656 503 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 MAPK6Q16659 721 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 PODNQ7Z5L7 613 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ABRAQ8N0Z2 381 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NUP93Q8N1F7 819 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 RIN3Q8TB24 985 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 NCLNQ969V3 563 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 ABHD8Q96I13 439 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 TUBGCP5Q96RT8 1024 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 LRRC4Q9HBW1 653 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 DAGLAQ9Y4D2 1042 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
CRNKL1-201ENST00000377327 CAPN8A6NHC0 703 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PFDN6O15212 129 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 LIASO43766 372 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 DGAT1O75907 488 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 DEFA1P59665 94 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 DEFA3P59666 94 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PPP3CAQ08209 521 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 ITGADQ13349 1161 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 WDR72Q3MJ13 1102 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 KYAT3Q6YP21 454 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 SNX32Q86XE0 403 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 HOMEZQ8IX15 550 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 FAM71AQ8IYT1 594 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PQLC1Q8N2U9 271 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PIDD1Q9HB75 910 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 TUBA8Q9NY65 449 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 RABGEF1Q9UJ41 708 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 COG5Q9UP83 839 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 ARHGAP23Q9P227 1491 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 TMEM131LA2VDJ0 1609 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 A6NHS1 94 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 IMPDH2P12268 514 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CCDC130P13994 396 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 KLRK1P26718 216 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 S100A5P33763 92 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 FDFT1P37268 417 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CDC16Q13042 620 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 UBAP2LQ14157 1087 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 UGP2Q16851 508 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 SATL1Q86VE3 508 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 ENDOVQ8N8Q3 282 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PDCD6IPQ8WUM4 868 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms