RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 FMO2Q99518 471 aa18.51■□□□□ 0.55
CTTN-203ENST00000376561 C11orf84Q9BUA3 381 aaPredicted RBP18.51■□□□□ 0.55
CTTN-203ENST00000376561 LRRC4Q9HBW1 653 aa18.51■□□□□ 0.55
CTTN-203ENST00000376561 ENPP3O14638 875 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 LIASO43766 372 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 AP1G2O75843 785 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 GAS8O95995 478 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 ADCY1Q08828 1119 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 DRICH1Q6PGQ1 229 aaPredicted RBP18.5■□□□□ 0.55
CTTN-203ENST00000376561 SMOQ99835 787 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 NCAPGQ9BPX3 1015 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 TBC1D13Q9NVG8 400 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 KANSL3Q9P2N6 904 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 AGPSO00116 658 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 COL6A1P12109 1028 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 TFE3P19532 575 aaPredicted RBP18.5■□□□□ 0.55
CTTN-203ENST00000376561 PLTPP55058 493 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 HDAC4P56524 1084 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 MRPS5P82675 430 aaKnown RBP18.5■□□□□ 0.55
CTTN-203ENST00000376561 SCYL2Q6P3W7 929 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 FAM171BQ6P995 826 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 COLGALT2Q8IYK4 626 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 FBXO25Q8TCJ0 367 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 DDX23Q9BUQ8 820 aaKnown RBP18.5■□□□□ 0.55
CTTN-203ENST00000376561 ELAC1Q9H777 363 aaKnown RBP18.5■□□□□ 0.55
CTTN-203ENST00000376561 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTTN-203ENST00000376561 DNPEPQ9ULA0 475 aa18.5■□□□□ 0.55
CTTN-203ENST00000376561 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 ARHGEF37A1IGU5 675 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 ENDOD1O94919 500 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 GGCXP38435 758 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 PTK6Q13882 451 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 BOLA3Q53S33 107 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 INTS6LQ5JSJ4 861 aaKnown RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 ALS2CLQ60I27 953 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 OVOS1Q6IE37 1185 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 BBS12Q6ZW61 710 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 ZMIZ2Q8NF64 920 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 NDRG1Q92597 394 aaKnown RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 CENPIQ92674 756 aaPredicted RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 MYLPFQ96A32 169 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 LRRC45Q96CN5 670 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 CALN1Q9BXU9 219 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 MED4Q9NPJ6 270 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 TMEM30AQ9NV96 361 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 NEU2Q9Y3R4 380 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 CST8O60676 142 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 HSF2BPO75031 334 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 TYMPP19971 482 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 NDUFV1P49821 464 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 ATN1P54259 1190 aaPredicted RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 CACNA2D1P54289 1103 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 CDH6P55285 790 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 BYSLQ13895 437 aaKnown RBP18.49■□□□□ 0.55
CTTN-203ENST00000376561 HSP90B2PQ58FF3 399 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 SIX6OS1Q8N1H7 587 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 OR10T2Q8NGX3 314 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 TEKT4Q8WW24 435 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 SEPT8Q92599 483 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 FAM149B1Q96BN6 582 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 HAUS1Q96CS2 278 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 SMARCD1Q96GM5 515 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 ADAM33Q9BZ11 813 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.49■□□□□ 0.553e-7■■■■■ 52.1
CTTN-203ENST00000376561 ASIC3Q9UHC3 531 aa18.49■□□□□ 0.55
CTTN-203ENST00000376561 TMEM189-UBE2V1I3L0A0 370 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 SYF2O95926 243 aaKnown RBP18.48■□□□□ 0.55
CTTN-203ENST00000376561 MATKP42679 507 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 ARSEP51690 589 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 TKTL1P51854 596 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 DYNLT1P63172 113 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 FAM193AP78312 1265 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 TMC3Q7Z5M5 1100 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 THEM5Q8N1Q8 247 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 TBCBQ99426 244 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 PKMYT1Q99640 499 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
CTTN-203ENST00000376561 OR1G1P47890 313 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 RABGGTBP53611 331 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 YWHAZP63104 245 aaKnown RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 LMNB2Q03252 620 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 TRIP13Q15645 432 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 APBB2Q92870 758 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 FAM193BQ96PV7 902 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 WHRNQ9P202 907 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 DNAJB4Q9UDY4 337 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 PCDHB7Q9Y5E2 793 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 SCN5AQ14524 2016 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 IVDP26440 423 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 YWHAHQ04917 246 aaPredicted RBP18.47■□□□□ 0.55
CTTN-203ENST00000376561 DPYSL3Q14195 570 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 CFAP58Q5T655 872 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 SLC39A5Q6ZMH5 540 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 ZNF365Q70YC5 407 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
CTTN-203ENST00000376561 RFX6Q8HWS3 928 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms