RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 IKBKGQ9Y6K9 419 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 TTLL13PA6NNM8 815 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 H3BRJ5 948 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 K7ERI5 159 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 LRCH4O75427 683 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 NR3C2P08235 984 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 TNFSF9P41273 254 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SERPINB4P48594 390 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 CACNA2D1P54289 1103 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 MYL6P60660 151 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 GHRHRQ02643 423 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC25A11Q02978 314 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 KRT72Q14CN4 511 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 CES4AQ5XG92 561 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 AP1ARQ63HQ0 302 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC10A4Q96EP9 437 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 APOPT1Q96IL0 206 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 CGRRF1Q99675 332 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC9A2Q9UBY0 812 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 STRIP2Q9ULQ0 834 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 STYXL1Q9Y6J8 313 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 RGS20O76081 388 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 TGDSO95455 350 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 INHBAP08476 426 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 UBTFL6P0CB48 400 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 KITP10721 976 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 KCNA2P16389 499 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 KDELR1P24390 212 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 POLE2P56282 527 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 ZNF200P98182 395 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 DPYSL3Q14195 570 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CWF19L1Q69YN2 538 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 NPNTQ6UXI9 565 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CCNJLQ8IV13 435 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CISHQ9NSE2 258 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 MARCOQ9UEW3 520 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 IQANK1A0A1B0GTG1 560 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CCDC195A0A1B0GUA6 201 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 MAP3K7O43318 606 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 SNUPNO95149 360 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CELF2O95319 508 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 EIF3EP60228 445 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 KDSRQ06136 332 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 EMC2Q15006 297 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 DENND1BQ6P3S1 775 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 BBS12Q6ZW61 710 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CHSY1Q86X52 802 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 RFX6Q8HWS3 928 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 UBR7Q8N806 425 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 PPFIBP2Q8ND30 876 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC44A1Q8WWI5 657 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 CNTN3Q9P232 1028 aa14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 PPARGC1AQ9UBK2 798 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-202ENST00000375692 SMAPO00193 183 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 STAM2O75886 525 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 PSAPP07602 524 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 GCLCP48506 637 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 RTP1P59025 263 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 ACTR2P61160 394 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC18A2Q05940 514 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 ZBTB33Q86T24 672 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 CTAGE3PQ8IX95 158 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 RBM15BQ8NDT2 890 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 DEPTORQ8TB45 409 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 HSPH1Q92598 858 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 SRPK1Q96SB4 655 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 MTMR12Q9C0I1 747 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 ASCC2Q9H1I8 757 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 WDR35Q9P2L0 1181 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 CYTH4Q9UIA0 394 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 PAPPA2Q9BXP8 1791 aa14.71□□□□□ -0.05
CLCNKA-202ENST00000375692 A0A0B4J269 797 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 TRIM49D1C9J1S8 452 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 CYB561D2O14569 222 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 ZCCHC18P0CG32 403 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 RBP3P10745 1247 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 KRT3P12035 628 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 PTPN20Q4JDL3 420 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 CST9Q5W186 159 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 PPM1NQ8N819 430 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 KCTD6Q8NC69 237 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 SHKBP1Q8TBC3 707 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 GATA6Q92908 595 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 CALN1Q9BXU9 219 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 IMPG2Q9BZV3 1241 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 SLC13A1Q9BZW2 595 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 TXNRD2Q9NNW7 524 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 KCNH4Q9UQ05 1017 aa14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 COL11A1P12107 1806 aaPredicted RBP14.71□□□□□ -0.06
CLCNKA-202ENST00000375692 DOCK5Q9H7D0 1870 aa14.7□□□□□ -0.06
CLCNKA-202ENST00000375692 PARP14Q460N5 1801 aa14.7□□□□□ -0.06
CLCNKA-202ENST00000375692 CXorf49A8MYA2 514 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-202ENST00000375692 COPEO14579 308 aa14.7□□□□□ -0.06
CLCNKA-202ENST00000375692 CXCL11O14625 94 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms