RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KCNJ2P63252 427 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SV2CQ496J9 727 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SH3GL2Q99962 352 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 CASS4Q9NQ75 786 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 ASTN1O14525 1302 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 KDM1AO60341 852 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 IFNA8P32881 189 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 SPATA2LQ8IUW3 424 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 C4orf32Q8N8J7 132 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 RNF217Q8TC41 542 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 HSD3B7Q9H2F3 369 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 AP4E1Q9UPM8 1137 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 SNX13Q9Y5W8 968 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 JCADQ9P266 1359 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ANXA9O76027 345 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 KCNK10P57789 538 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 LRRC74BQ6ZQY2 392 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 STRA8Q7Z7C7 330 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 CATSPERBQ9H7T0 1116 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 MYOZ2Q9NPC6 264 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 PCDHGB4Q9UN71 923 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ACTL7BQ9Y614 415 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 BCL9O00512 1426 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 TMCC1O94876 653 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ZSCAN5DPP0CG00 497 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 CPB1P15086 417 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 DLG4P78352 724 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 MGAT5Q09328 741 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 LAMB3Q13751 1172 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ANGEL2Q5VTE6 544 aaKnown RBP11.93□□□□□ -0.5
PTCH1-203ENST00000375274 SZRD1Q7Z422 152 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 EXOC3L1Q86VI1 746 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 KATNAL2Q8IYT4 538 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF786Q8N393 782 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 RFWD2Q8NHY2 731 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 TMEM176AQ96HP8 235 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 BEGAINQ9BUH8 593 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
PTCH1-203ENST00000375274 PYGLP06737 847 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 TAF6P49848 677 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 MPP3Q13368 585 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ADRM1Q16186 407 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 AMHR2Q16671 573 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 GLRA4Q5JXX5 417 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 AGAP9Q5VTM2 703 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 PDPK2PQ6A1A2 396 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 LRRC8BQ6P9F7 803 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 MAP4K3Q8IVH8 894 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 PXMP2Q9NR77 195 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 CHST12Q9NRB3 414 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 THAP1Q9NVV9 213 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 STARD13Q9Y3M8 1113 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 OPLAHO14841 1288 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 GJB6O95452 261 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ALBP02768 609 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 TRPC1P48995 793 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 FAAP100Q0VG06 881 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 TBL3Q12788 808 aaKnown RBP11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NFIL3Q16649 462 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 APOL2Q9BQE5 337 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 LRRC19Q9H756 370 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 UBQLN1Q9UMX0 589 aaKnown RBP11.92□□□□□ -0.5
PTCH1-203ENST00000375274 MYO1DO94832 1006 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NPTXRO95502 500 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 SLC25A27O95847 323 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 PTPN7P35236 360 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 RAP1GAPP47736 663 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NEK2P51955 445 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 CDK16Q00536 496 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 PTK2BQ14289 1009 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 KIZQ2M2Z5 673 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 STYK1Q6J9G0 422 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 POU5F2Q8N7G0 328 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ALG3Q92685 438 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NMD3Q96D46 503 aaKnown RBP11.92□□□□□ -0.5
PTCH1-203ENST00000375274 CYP3A43Q9HB55 503 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ACOT9Q9Y305 439 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 V9GYQ6 96 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NCANO14594 1321 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 SUPT3HB4E1H0 165 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 F8VP50 259 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 SLCO1B7G3V0H7 640 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 TULP2O00295 520 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 ESRRBO95718 433 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 CYP3A4P08684 503 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms