RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 FOXP3Q9BZS1 431 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 DENND2DQ9H6A0 471 aaPredicted RBP17.68■□□□□ 0.42
PHF1-202ENST00000374516 KLHL11Q9NVR0 708 aa17.68■□□□□ 0.42
PHF1-202ENST00000374516 TREHO43280 583 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 CALB1P05937 261 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 KLRC2P26717 231 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 CTCFP49711 727 aaPredicted RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 YWHAEP62258 255 aaKnown RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 PKN2Q16513 984 aaKnown RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 DNAJC24Q6P3W2 148 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 DCUN1D2Q6PH85 259 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 TDRPQ86YL5 185 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SLC4A11Q8NBS3 891 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 TTC8Q8TAM2 541 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 LRRC8CQ8TDW0 803 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SH3TC2Q8TF17 1288 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SH3GL3Q99963 347 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 PCDHGC3Q9UN70 934 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 TMEM191CA6NGB0 347 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 F8VP50 259 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 POC1B-GALNT4F8VUJ3 575 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 ENTPD5O75356 428 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 OGDHQ02218 1023 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 P3H1Q32P28 736 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 RGMBQ6NW40 437 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 CEP128Q6ZU80 1094 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 TMEM40Q8WWA1 233 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 ZMAT2Q96NC0 199 aaKnown RBP17.67■□□□□ 0.42
PHF1-202ENST00000374516 SMC6Q96SB8 1091 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 SAYSD1Q9NPB0 183 aa17.67■□□□□ 0.42
PHF1-202ENST00000374516 H0Y3Z8 333 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 GOLGA8SH3BPF8 625 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 KRT15P19012 456 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 MRPS35P82673 323 aaKnown RBP17.66■□□□□ 0.42
PHF1-202ENST00000374516 ZNF252P-AS1Q0IIN9 211 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 SLC1A5Q15758 541 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 PTPN20Q4JDL3 420 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 TAF1BQ53T94 588 aaPredicted RBP17.66■□□□□ 0.42
PHF1-202ENST00000374516 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 SPDYAQ5MJ70 313 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 GSTA5Q7RTV2 222 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 C4orf33Q8N1A6 199 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 USP6NLQ92738 828 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 RPL26L1Q9UNX3 145 aaKnown RBP17.66■□□□□ 0.42
PHF1-202ENST00000374516 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.66■□□□□ 0.42
PHF1-202ENST00000374516 TCRBV5S1A1TA0A578 114 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 CILPO75339 1184 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 PTPN4P29074 926 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 GRM5P41594 1212 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 SARNPP82979 210 aaKnown RBP17.66■□□□□ 0.42
PHF1-202ENST00000374516 KYAT1Q16773 422 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 ZFYVE27Q5T4F4 411 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 THEMIS2Q5TEJ8 643 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 PPP1R2P3Q6NXS1 205 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 TMEM176AQ96HP8 235 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 OSBPL8Q9BZF1 889 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 ZNF518BQ9C0D4 1074 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 TLE6Q9H808 572 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 CYLDQ9NQC7 956 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 IP6K2Q9UHH9 426 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 C2CD2Q9Y426 696 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 ZSWIM8A7E2V4 1837 aa17.66■□□□□ 0.42
PHF1-202ENST00000374516 MBLAC1A4D2B0 266 aaPredicted RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 PI4K2BG5E9Z4 385 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 TNPO2O14787 897 aaKnown RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 PPEF2O14830 753 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 FESP07332 822 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 PDHA1P08559 390 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 ACADSP16219 412 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 CA4P22748 312 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 PSEN2P49810 448 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 RBP5P82980 135 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 SLC45A4Q5BKX6 768 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 SLC27A1Q6PCB7 646 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 DNAJC9Q8WXX5 260 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 DCLRE1BQ9H816 532 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 LRRD1A4D1F6 860 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 DARSP14868 501 aaKnown RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 AKAP5P24588 427 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 CTGFP29279 349 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 ATICP31939 592 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 CDH5P33151 784 aaPredicted RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 OTOAQ7RTW8 1153 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 ACSF2Q96CM8 615 aaPredicted RBP17.65■□□□□ 0.42
PHF1-202ENST00000374516 TTC25Q96NG3 672 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 CPXM1Q96SM3 734 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 AP5M1Q9H0R1 490 aa17.65■□□□□ 0.42
PHF1-202ENST00000374516 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms