RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SIX6OS1Q8N1H7 587 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 SCML4Q8N228 414 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 PARVAQ9NVD7 372 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRIM10Q9UDY6 481 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 YIPF1Q9Y548 306 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 DUSP10Q9Y6W6 482 aa15.39■□□□□ 0.05
SMPDL3B-201ENST00000373888 PRRG1O14668 218 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 URI1O94763 535 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 MTA2O94776 668 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC6A3Q01959 620 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PTPROQ16827 1216 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PPP1R15BQ5SWA1 713 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SDHAF4Q5VUM1 108 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PM20D1Q6GTS8 502 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 OR6B2Q6IFH4 312 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 DNAJC24Q6P3W2 148 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CCDC149Q6ZUS6 474 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 DENND5BQ6ZUT9 1274 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 RTL10Q7L3V2 364 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 MTERF4Q7Z6M4 381 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 NUP93Q8N1F7 819 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC35G2Q8TBE7 412 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 MRPL38Q96DV4 380 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 NUP85Q9BW27 656 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 MRPL47Q9HD33 250 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 COMMD8Q9NX08 183 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 IL37Q9NZH6 218 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CTTNBP2NLQ9P2B4 639 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CHORDC1Q9UHD1 332 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SALL4Q9UJQ4 1053 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 TRANK1O15050 2925 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PLXNA3P51805 1871 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 ATG2AQ2TAZ0 1938 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CTAGE9A4FU28 777 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SIGLEC16A6NMB1 481 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 RFXAPO00287 272 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 ZBED1O96006 694 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 ALDH1A3P47895 512 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 HADHBP55084 474 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 MRPS5P82675 430 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 FAM102AQ5T9C2 384 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC26A9Q7LBE3 791 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PHLDB2Q86SQ0 1253 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 KREMEN2Q8NCW0 462 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CLEC4CQ8WTT0 213 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 PIWIL1Q96J94 861 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 CALR3Q96L12 384 aaKnown RBP15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 FBXO44Q9H4M3 255 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 GUCA1BQ9UMX6 200 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 COG5Q9UP83 839 aa15.38■□□□□ 0.05
SMPDL3B-201ENST00000373888 FAM92AA1XBS5 289 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SART1O43290 800 aaKnown RBP15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SPATA31D3P0C874 917 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 KRT3P12035 628 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 DAOAP59103 153 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 PLD1Q13393 1074 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 ZNF569Q5MCW4 686 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SPATA31D4Q6ZUB0 917 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 ADGRD2Q7Z7M1 963 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC7A14Q8TBB6 771 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 ZNF564Q8TBZ8 553 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC22A17Q8WUG5 538 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 HDAC7Q8WUI4 952 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 IRGQQ8WZA9 623 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 WDR24Q96S15 920 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 PLEKHA4Q9H4M7 779 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 OSGEPQ9NPF4 335 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 ASNSD1Q9NWL6 643 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 TMEM59LQ9UK28 342 aa15.37■□□□□ 0.05
SMPDL3B-201ENST00000373888 MACROD2A1Z1Q3 448 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 SLC38A8A6NNN8 435 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 C8AP07357 584 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 GLI1P08151 1106 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 USP46P62068 366 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 TUBB4BP68371 445 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 TWF1Q12792 350 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 DUSP6Q16828 381 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 EFHC1Q5JVL4 640 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 ARCQ7LC44 396 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 STKLD1Q8NE28 680 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 FEZF2Q8TBJ5 459 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 GPR152Q8TDT2 470 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 GIPC2Q8TF65 315 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 KHSRPQ92945 711 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 CDCA3Q99618 268 aaPredicted RBP15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 TTLL2Q9BWV7 592 aa15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 TTYH1Q9H313 450 aaPredicted RBP15.36■□□□□ 0.05
SMPDL3B-201ENST00000373888 METTL5Q9NRN9 209 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms