RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 A0A0J9YVX5 310 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 MED7O43513 233 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 VAV1P15498 845 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 SH3BGRP55822 239 aaPredicted RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 BTKQ06187 659 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 KLC3Q6P597 504 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 PRPF39Q86UA1 669 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 SCYL1Q96KG9 808 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 AGAP3Q96P47 875 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 NDEL1Q9GZM8 345 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 KLC2Q9H0B6 622 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 PXMP2Q9NR77 195 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 RNF19AQ9NV58 838 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 DDX56Q9NY93 547 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 PDLIM1O00151 329 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 NDC80O14777 642 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 LIASO43766 372 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 TMED10P49755 219 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 STAT5BP51692 787 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 OXCT1P55809 520 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 GAD2Q05329 585 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 NPNTQ6UXI9 565 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 DCLK2Q8N568 766 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 MTBPQ96DY7 904 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 MYH11P35749 1972 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 FAM237BA0A1B0GVD1 139 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 E7ENQ6 273 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 PEX10O60683 326 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 LYNP07948 512 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 CCNG1P51959 295 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 ITGA7Q13683 1181 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 CYLC2Q14093 348 aaPredicted RBP12.58□□□□□ -0.4
NCDN-202ENST00000373243 MORF4L2Q15014 288 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 NETO2Q8NC67 525 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 RAB3IL1Q8TBN0 382 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 TIPINQ9BVW5 301 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 CHKBQ9Y259 395 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 GMEB1Q9Y692 573 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
NCDN-202ENST00000373243 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 SPTLC1O15269 473 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 ASLP04424 464 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 PRKCBP05771 671 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 P4HA1P13674 534 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 PTPN4P29074 926 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 TNFSF9P41273 254 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 NOMO3P69849 1222 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 TFDP2Q14188 446 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 RAPH1Q70E73 1250 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 LZICQ8WZA0 190 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 MECRQ9BV79 373 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 MRPL4Q9BYD3 311 aaKnown RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 NIF3L1Q9GZT8 377 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 AS3MTQ9HBK9 375 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 ASNSD1Q9NWL6 643 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 STRIP2Q9ULQ0 834 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 POLIQ9UNA4 740 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 PGM3O95394 542 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 MUTP22033 750 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 RASA2Q15283 850 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 RNF34Q969K3 372 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 OXCT2Q9BYC2 517 aaPredicted RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 CEP41Q9BYV8 373 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 MYH1P12882 1939 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 MYH4Q9Y623 1939 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 MEI4A8MW99 385 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 FCHO1O14526 889 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 LMNAP02545 664 aaKnown RBP12.57□□□□□ -0.4
NCDN-202ENST00000373243 GARTP22102 1010 aa12.57□□□□□ -0.4
NCDN-202ENST00000373243 GLRA2P23416 452 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms