RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 UTP15Q8TED0 518 aaKnown RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 COL26A1Q96A83 441 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 KLHL28Q9NXS3 571 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 KLHL3Q9UH77 587 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ITGB3P05106 788 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 NDUFAF6Q330K2 333 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 NECAB2Q7Z6G3 386 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ABHD10Q9NUJ1 306 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 SNRNP200O75643 2136 aaKnown RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 HOXA2O43364 376 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 RTN2O75298 545 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 AKR1B1P15121 316 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 TXNRD1Q16881 649 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 AGAP9Q5VTM2 703 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 DSG4Q86SJ6 1040 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 NLRP14Q86W24 1093 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 PRKAB1Q9Y478 270 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ATP7AQ04656 1500 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ZFYVE16Q7Z3T8 1539 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 C1DQ13901 141 aaKnown RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 FAM171BQ6P995 826 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 COLGALT2Q8IYK4 626 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 CHAMP1Q96JM3 812 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 TUBGCP4Q9UGJ1 667 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 CHORDC1Q9UHD1 332 aaPredicted RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ANXA9O76027 345 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 MROH9Q5TGP6 573 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 KLHL17Q6TDP4 642 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 TRPM8Q7Z2W7 1104 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 EFL1Q7Z2Z2 1120 aaKnown RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 STX12Q86Y82 276 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 FAM20CQ8IXL6 584 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.914e-23■■■■■ 82.8
PTPRT-207ENST00000373201 SCGNO76038 276 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ZNF23P17027 643 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ITGALP20701 1170 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 MAGEA10P43363 369 aaPredicted RBP9.38□□□□□ -0.91
PTPRT-207ENST00000373201 ATL2Q8NHH9 583 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 MS4A14Q96JA4 679 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 AHSPQ9NZD4 102 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
PTPRT-207ENST00000373201 RRN3P2A6NIE6 340 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 VTNP04004 478 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 SLC1A1P43005 524 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 SLC12A8A0AV02 714 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 M0QYT0 321 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 XYLBO75191 536 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 ECDO95905 644 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-207ENST00000373201 IFNA14P01570 189 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 AMHP03971 560 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 FDX1P10109 184 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 STILQ15468 1287 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 WLSQ5T9L3 541 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 RESP18Q5W5W9 173 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 TUFT1Q9NNX1 390 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 GMFGO60234 142 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 TDP2O95551 362 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 GYS2P54840 703 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-207ENST00000373201 TTC33Q6PID6 262 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-207ENST00000373201 LINC00301Q8NCQ3 95 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 PDGFCQ9NRA1 345 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 RHOCP08134 193 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 GMPSP49915 693 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CHI3L2Q15782 390 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 TRIQKQ629K1 86 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 FBXO42Q6P3S6 717 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 SLC25A12O75746 678 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 BOP1Q14137 746 aaKnown RBP9.37□□□□□ -0.91
PTPRT-207ENST00000373201 KIRREL3Q8IZU9 778 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 ATG16L2Q8NAA4 619 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CPB2Q96IY4 423 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 CTNNAL1Q9UBT7 734 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 LYVE1Q9Y5Y7 322 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 BRWD1Q9NSI6 2320 aa9.37□□□□□ -0.91
PTPRT-207ENST00000373201 A8MX80 341 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms