RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 ATP2A3Q93084 1043 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 NSUN4Q96CB9 384 aaKnown RBP2.03□□□□□ -2.08
UBE2A-203ENST00000371569 SHISA4Q96DD7 197 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 BARD1Q99728 777 aaKnown RBP2.03□□□□□ -2.08
UBE2A-203ENST00000371569 AGXT2Q9BYV1 514 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 ZCWPW1Q9H0M4 648 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 ALDH8A1Q9H2A2 487 aaPredicted RBP2.03□□□□□ -2.08
UBE2A-203ENST00000371569 SH3GLB2Q9NR46 395 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 PLSCR4Q9NRQ2 329 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 KCND1Q9NSA2 647 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 GJB4Q9NTQ9 266 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 TMLHEQ9NVH6 421 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 JKAMPQ9P055 326 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 ITGB1BP2Q9UKP3 347 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 CNOT6Q9ULM6 557 aaKnown RBP2.03□□□□□ -2.08
UBE2A-203ENST00000371569 NFU1Q9UMS0 254 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.03□□□□□ -2.08
UBE2A-203ENST00000371569 KIAA1107Q9UPP5 1409 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 KIDINS220Q9ULH0 1771 aa2.03□□□□□ -2.08
UBE2A-203ENST00000371569 SLIT3O75094 1523 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 A0A1W2PPH5 198 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PI4KAP2A4QPH2 592 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 AQP7P3A6NL99 342 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 H0YGN5 161 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 MYO1CO00159 1063 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 NRP1O14786 923 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 RTN3O95197 1032 aaPredicted RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 SGPL1O95470 568 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 NDST3O95803 873 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 AHSGP02765 367 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TFRCP02786 760 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 CD1AP06126 327 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 ATP1A3P13637 1013 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 ACVR2AP27037 513 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 VIPR2P41587 438 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 CCR5P51681 352 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PNLIPRP1P54315 467 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PRR5P85299 388 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PTH1RQ03431 593 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 ADAM9Q13443 819 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 SLC29A2Q14542 456 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PSMD6Q15008 389 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 EIF4HQ15056 248 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 DLGAP5Q15398 846 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TAF11Q15544 211 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TARBP2Q15633 366 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 SLC15A2Q16348 729 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TIGD6Q17RP2 521 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 FAM47AQ5JRC9 791 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 C1QTNF12Q5T7M4 302 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 FAM205BPQ63HN1 556 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 OLFML2BQ68BL8 750 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 NFRKBQ6P4R8 1299 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TMTC3Q6ZXV5 915 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 GAS2L3Q86XJ1 694 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TCP11L2Q8N4U5 519 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TMEM57Q8N5G2 664 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 TTC9BQ8N6N2 239 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PIK3C3Q8NEB9 887 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 ST8SIA4Q92187 359 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 SORCS2Q96PQ0 1159 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PPP1R9BQ96SB3 815 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 C1orf43Q9BWL3 253 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 CPEB1Q9BZB8 566 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 PAIP1Q9H074 479 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 RNPEPQ9H4A4 650 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 G6PC2Q9NQR9 355 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 AJAP1Q9UKB5 411 aaPredicted RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 SCAPERQ9BY12 1400 aa2.03□□□□□ -2.09
UBE2A-203ENST00000371569 RRBP1Q9P2E9 1410 aaKnown RBP2.03□□□□□ -2.09
UBE2A-203ENST00000371569 LRRIQ1Q96JM4 1722 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 COL4A5P29400 1685 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 QRICH2Q9H0J4 1663 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 LOC102723971A0A1B0GUV8 181 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 PRSS29PA6NIE9 313 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 B4DLN1 442 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 CYR61O00622 381 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 N4BP3O15049 544 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 GRM6O15303 877 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 PJA2O43164 708 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ASNA1O43681 348 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 DKC1O60832 514 aaKnown RBP eCLIP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 URI1O94763 535 aaPredicted RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 KLHL18O94889 574 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 IL18BPO95998 194 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 GALNSP34059 522 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 PSMC2P35998 433 aaKnown RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ZEB1P37275 1124 aaPredicted RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 SLC11A2P49281 568 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ALDH18A1P54886 795 aaKnown RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ARF3P61204 181 aaPredicted RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 YBX1P67809 324 aaKnown RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 DLG4P78352 724 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ARF1P84077 181 aaKnown RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 EXOSC9Q06265 439 aaKnown RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 CACNB2Q08289 660 aaPredicted RBP2.02□□□□□ -2.09
UBE2A-203ENST00000371569 SCAPQ12770 1279 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 CUL4AQ13619 759 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 SLC12A1Q13621 1099 aa2.02□□□□□ -2.09
UBE2A-203ENST00000371569 ARHGEF7Q14155 803 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms