RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PFKLP17858 780 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
RPF1-202ENST00000370656 POLR2BP30876 1174 aaKnown RBP16.08■□□□□ 0.16
RPF1-202ENST00000370656 DPP6P42658 865 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 PRCPP42785 496 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 LHX1P48742 406 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 IRX4P78413 519 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 MRPS21P82921 87 aaKnown RBP16.08■□□□□ 0.16
RPF1-202ENST00000370656 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 STK4Q13043 487 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 CRY1Q16526 586 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 LPCAT2Q7L5N7 544 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 SCN4BQ8IWT1 228 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 LRRC52Q8N7C0 313 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
RPF1-202ENST00000370656 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 EXOC1Q9NV70 894 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 EHD2Q9NZN4 543 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 L1RE1Q9UN81 338 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 EXOC7Q9UPT5 735 aa16.08■□□□□ 0.16
RPF1-202ENST00000370656 R3HCC1Q9Y3T6 440 aaKnown RBP16.08■□□□□ 0.16
RPF1-202ENST00000370656 C2orf78A6NCI8 922 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 PATE3B3GLJ2 98 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 K7EQS6 105 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 ITGB3P05106 788 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 BCKDHBP21953 392 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 RDXP35241 583 aaKnown RBP16.07■□□□□ 0.16
RPF1-202ENST00000370656 MAGEA11P43364 429 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 BYSLQ13895 437 aaKnown RBP16.07■□□□□ 0.16
RPF1-202ENST00000370656 TRIM61Q5EBN2 209 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
RPF1-202ENST00000370656 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 GUF1Q8N442 669 aaKnown RBP16.07■□□□□ 0.16
RPF1-202ENST00000370656 CCDC33Q8N5R6 958 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 DEFB124Q8NES8 71 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 MDGA1Q8NFP4 955 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 WHAMMQ8TF30 809 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 FAM213AQ9BRX8 229 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 LINC00597Q9H2U6 94 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 POLMQ9NP87 494 aaPredicted RBP16.07■□□□□ 0.16
RPF1-202ENST00000370656 GDAP2Q9NXN4 497 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 GCNT4Q9P109 453 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 ITGA11Q9UKX5 1188 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 PLXND1Q9Y4D7 1925 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 GON4LQ3T8J9 2241 aa16.07■□□□□ 0.16
RPF1-202ENST00000370656 CEP192Q8TEP8 1941 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 TNRC6BQ9UPQ9 1833 aaKnown RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 SLC9A3R1O14745 358 aaPredicted RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 TNFRSF10BO14763 440 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 OPRD1P41143 372 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 HSF5Q4G112 596 aaPredicted RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 ZNF720Q7Z2F6 126 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 SYT12Q8IV01 421 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 ADGRF2Q8IZF7 708 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 TOP6BLQ8N6T0 577 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 KIAA1958Q8N8K9 716 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 C1orf127Q8N9H9 656 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 ZCCHC14Q8WYQ9 949 aaKnown RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 GATA6Q92908 595 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 CEP295NLQ96MC4 621 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 TMEM121BQ9BXQ6 578 aaPredicted RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 TRPM5Q9NZQ8 1165 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
RPF1-202ENST00000370656 NEUROG3Q9Y4Z2 214 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
RPF1-202ENST00000370656 FASNP49327 2511 aaKnown RBP16.06■□□□□ 0.16
RPF1-202ENST00000370656 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 ADCY5O95622 1261 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 TOP3BO95985 862 aaKnown RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 KRT19P08727 400 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 GAP43P17677 238 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 ANXA13P27216 316 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 ADSSP30520 456 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 TPM4P67936 248 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 RBP5P82980 135 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 PAK1Q13153 545 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 STIM1Q13586 685 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 MAPRE1Q15691 268 aaKnown RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 CDKAL1Q5VV42 579 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 VSTM1Q6UX27 236 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 BRSK2Q8IWQ3 736 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 SPATA17Q96L03 361 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 PKMYT1Q99640 499 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 MRPL44Q9H9J2 332 aaKnown RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 OLFML3Q9NRN5 406 aa16.05■□□□□ 0.16
RPF1-202ENST00000370656 RBAKQ9NYW8 714 aaPredicted RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
RPF1-202ENST00000370656 SEL1LQ9UBV2 794 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms