RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 CPB1P15086 417 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 SLC25A11Q02978 314 aaKnown RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 NFE2Q16621 373 aaPredicted RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 CCDC14Q49A88 953 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 TXNRD3NBQ6F5E7 133 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 TAS1R1Q7RTX1 841 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 KLHL7Q8IXQ5 586 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 EXD1Q8NHP7 514 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 ACSF2Q96CM8 615 aaPredicted RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 IGSF21Q96ID5 467 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 PGLYRP2Q96PD5 576 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 KRT12Q99456 494 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 UBXN6Q9BZV1 441 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 RC3H2Q9HBD1 1191 aaKnown RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 NGRNQ9NPE2 291 aaKnown RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 HHLA1C9JL84 531 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 H7C4K7 107 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 DPYSL4O14531 572 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 FGBP02675 491 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 KRT7P08729 469 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 MIPP30301 263 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 RAB41Q5JT25 222 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 C8orf74Q6P047 294 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 ANKS3Q6ZW76 656 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 ZNF365Q70YC5 407 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 POLNQ7Z5Q5 900 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 SLC13A5Q86YT5 568 aaPredicted RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 CMTR2Q8IYT2 770 aaKnown RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 FAM172AQ8WUF8 416 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 ZNF558Q96NG5 402 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 ANKZF1Q9H8Y5 726 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 CNGB3Q9NQW8 809 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 DDX56Q9NY93 547 aaKnown RBP20.36■□□□□ 0.85
CHTOP-204ENST00000368694 USP18Q9UMW8 372 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 PI4K2BG5E9Z4 385 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 CCDC188H7C350 402 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 USP17L7P0C7H9 530 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 KCNT1Q5JUK3 1230 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 C16orf59Q7L2K0 433 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 ARCQ7LC44 396 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 SCN4BQ8IWT1 228 aa20.35■□□□□ 0.85
CHTOP-204ENST00000368694 RNF25Q96BH1 459 aaPredicted RBP20.35■□□□□ 0.85
CHTOP-204ENST00000368694 RBM41Q96IZ5 413 aaKnown RBP20.35■□□□□ 0.85
CHTOP-204ENST00000368694 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHTOP-204ENST00000368694 MRPL42Q9Y6G3 142 aaKnown RBP20.35■□□□□ 0.85
CHTOP-204ENST00000368694 IL1R2P27930 398 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PCK1P35558 622 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 CETN2P41208 172 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 DAOAP59103 153 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 YWHAZP63104 245 aaKnown RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 USP41Q3LFD5 358 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PRSS55Q6UWB4 352 aaPredicted RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 FUBP3Q96I24 572 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 LRRC1Q9BTT6 524 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 DDX47Q9H0S4 455 aaKnown RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PNPLA8Q9NP80 782 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PCDHB5Q9Y5E4 795 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 KIAA1671Q9BY89 1806 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 LRRD1A4D1F6 860 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 SART1O43290 800 aaKnown RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 ZBED1O96006 694 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 MRPS25P82663 173 aaKnown RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 IFRD2Q12894 506 aaPredicted RBP20.34■□□□□ 0.85
CHTOP-204ENST00000368694 RAB6CQ53S08 254 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 KIAA1841Q6NSI8 718 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 SCYL2Q6P3W7 929 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 RCOR2Q8IZ40 523 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 DEFB106AQ8N104 65 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 TMEM169Q96HH4 297 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PARD6BQ9BYG5 372 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 RAB6CQ9H0N0 254 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 MTUS1Q9ULD2 1270 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 NR2E1Q9Y466 385 aa20.34■□□□□ 0.85
CHTOP-204ENST00000368694 PRPSAP2O60256 369 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 DAB1O75553 588 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 RALAP11233 206 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 LAG3P18627 525 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 MATKP42679 507 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 PTPN9P43378 593 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 DCAF6Q58WW2 860 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 HSPH1Q92598 858 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 HEMGNQ9BXL5 484 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 POPDC2Q9HBU9 364 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 MYO16Q9Y6X6 1858 aa20.33■□□□□ 0.85
CHTOP-204ENST00000368694 TCRBV7S2A1N4TA0A589 114 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 YJEFN3A6XGL0 299 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 E7ENQ6 273 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 GLI1P08151 1106 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 SYN1P17600 705 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 TFE3P19532 575 aaPredicted RBP20.33■□□□□ 0.84
CHTOP-204ENST00000368694 HFE2Q6ZVN8 426 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 RIN2Q8WYP3 895 aaPredicted RBP20.33■□□□□ 0.84
CHTOP-204ENST00000368694 SLITRK1Q96PX8 696 aa20.33■□□□□ 0.84
CHTOP-204ENST00000368694 DDX23Q9BUQ8 820 aaKnown RBP20.33■□□□□ 0.84
CHTOP-204ENST00000368694 C2CD2LO14523 706 aa20.32■□□□□ 0.84
CHTOP-204ENST00000368694 CAPN9O14815 690 aa20.32■□□□□ 0.84
CHTOP-204ENST00000368694 TRUB2O95900 331 aaKnown RBP20.32■□□□□ 0.84
CHTOP-204ENST00000368694 SLC5A3P53794 718 aa20.32■□□□□ 0.84
CHTOP-204ENST00000368694 RSPO2Q6UXX9 243 aaPredicted RBP20.32■□□□□ 0.84
CHTOP-204ENST00000368694 ZNF771Q7L3S4 317 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms