RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 C12orf40Q86WS4 652 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 SPATA20Q8TB22 786 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 DEPTORQ8TB45 409 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 TRMT2BQ96GJ1 504 aaKnown RBP11.16□□□□□ -0.62
TUBE1-201ENST00000368657 VCPIP1Q96JH7 1222 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 MYRFLQ96LU7 910 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 GABRG3Q99928 467 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 POLR1BQ9H9Y6 1135 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 CD93Q9NPY3 652 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 USP36Q9P275 1121 aaKnown RBP11.16□□□□□ -0.62
TUBE1-201ENST00000368657 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 ICE1Q9Y2F5 2266 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 SPTBN1Q01082 2364 aaKnown RBP11.15□□□□□ -0.62
TUBE1-201ENST00000368657 GFRA2O00451 464 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 MPOP05164 745 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 NEFLP07196 543 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 ADH5P11766 374 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 CKMT2P17540 419 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 TNFRSF8P28908 595 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 LRPAP1P30533 357 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 CTSKP43235 329 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 NAMPTP43490 491 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 GABREP78334 506 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-201ENST00000368657 INSM1Q01101 510 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-201ENST00000368657 GAD2Q05329 585 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 ZC2HC1CQ53FD0 456 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-201ENST00000368657 C10orf76Q5T2E6 689 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 BTBD8Q5XKL5 378 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 IGF2-ASQ6U949 168 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 TICAM1Q8IUC6 712 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 CEP120Q8N960 986 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 DRC1Q96MC2 740 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 SLC25A18Q9H1K4 315 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 RPF1Q9H9Y2 349 aaKnown RBP11.15□□□□□ -0.62
TUBE1-201ENST00000368657 KCNMB3Q9NPA1 279 aa11.15□□□□□ -0.62
TUBE1-201ENST00000368657 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 CBX4O00257 560 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 LEFTY2O00292 366 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
TUBE1-201ENST00000368657 EDN1P05305 212 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 ODC1P11926 461 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 ABCB4P21439 1286 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 NLRP5P59047 1200 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 IL9RQ01113 521 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 GRIN1Q05586 938 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 NOLC1Q14978 699 aaKnown RBP eCLIP11.14□□□□□ -0.63
TUBE1-201ENST00000368657 NCAPHQ15003 741 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 PPP2R5AQ15172 486 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 IGFBP7Q16270 282 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 NCAPH2Q6IBW4 605 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 CENPQQ7L2Z9 268 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-201ENST00000368657 MAEAQ7L5Y9 396 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 SKAP1Q86WV1 359 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 THEM5Q8N1Q8 247 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 OR10T2Q8NGX3 314 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 CCNL2Q96S94 520 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-201ENST00000368657 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.14□□□□□ -0.63
TUBE1-201ENST00000368657 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 TBC1D14Q9P2M4 693 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 HCN2Q9UL51 889 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 PCDHB5Q9Y5E4 795 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 OBSL1O75147 1896 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 TMEM131Q92545 1883 aa11.14□□□□□ -0.63
TUBE1-201ENST00000368657 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 K7ERI5 159 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 YKT6O15498 198 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 USO1O60763 962 aaKnown RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 TADA3O75528 432 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 NOL4O94818 638 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 CYP3A5P20815 502 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 CHMLP26374 656 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 CDC27P30260 824 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 TPMTP51580 245 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 ZNF132P52740 706 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 RCAN1P53805 252 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 RPL10AP62906 217 aaKnown RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 SKOR1P84550 965 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 ST3GAL1Q11201 340 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 USP53Q70EK8 1073 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 GATAD2AQ86YP4 633 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 DCP1BQ8IZD4 617 aaKnown RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 EID2Q8N6I1 236 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 TERB1Q8NA31 727 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 EXTL1Q92935 676 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 SENP8Q96LD8 212 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 SLC6A17Q9H1V8 727 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 CDT1Q9H211 546 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 ZNF768Q9H5H4 540 aaKnown RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 PTPRHQ9HD43 1115 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms