RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ETFBP38117 255 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SLC1A1P43005 524 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 HDAC4P56524 1084 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 ZNF268Q14587 947 aaPredicted RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 CCDC85BQ15834 202 aaPredicted RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 ECM1Q16610 540 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 GPAT2Q6NUI2 795 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 TTC7BQ86TV6 843 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 DDIASQ8IXT1 998 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 CYP4X1Q8N118 509 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SKA2Q8WVK7 121 aaPredicted RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 SYT15Q9BQS2 421 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 MMADHCQ9H3L0 296 aaPredicted RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 TASP1Q9H6P5 420 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 BCAS3Q9H6U6 928 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 LRRC4Q9HBW1 653 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 FAM49BQ9NUQ9 324 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SLC17A7Q9P2U7 560 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 PCDHB2Q9Y5E7 798 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SNX5Q9Y5X3 404 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 NOL4O94818 638 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 CYP2C8P10632 490 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 STMN1P16949 149 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 TRMT5Q32P41 509 aaKnown RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 BNIPLQ7Z465 357 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 UBA3Q8TBC4 463 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 PIK3CDO00329 1044 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 KLHL2O95198 593 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SERPINB8P50452 374 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 WLSQ5T9L3 541 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 RWDD4Q6NW29 188 aaKnown RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 SYDE1Q6ZW31 735 aaPredicted RBP11.2□□□□□ -0.62
EBF3-202ENST00000368648 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 GANQ9H2C0 597 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SEL1LQ9UBV2 794 aa11.2□□□□□ -0.62
EBF3-202ENST00000368648 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 PEX6Q13608 980 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TSTA3Q13630 321 aaPredicted RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 TTC27Q6P3X3 843 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CCDC81Q6ZN84 652 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 MARK2Q7KZI7 788 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 NANOGNBQ7Z5D8 188 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 PPIL6Q8IXY8 311 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 FEZF2Q8TBJ5 459 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CNDP1Q96KN2 507 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TMEM79Q9BSE2 394 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TMEM106CQ9BVX2 250 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TTYH3Q9C0H2 523 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 RARBP10826 455 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SDC4P31431 198 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 NME3Q13232 169 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 FASTKD3Q14CZ7 662 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 XKR3Q5GH77 459 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CLEC4FQ8N1N0 589 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 USP33Q8TEY7 942 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SRPK1Q96SB4 655 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 NMUR2Q9GZQ4 415 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CCDC68Q9H2F9 335 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SOX13Q9UN79 622 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 R3HDM2Q9Y2K5 976 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 ICAM1P05362 532 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 NUDT17P0C025 328 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 TPBGLP0DKB5 382 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 AVPR1AP37288 418 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 PRKCEQ02156 737 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CARTPTQ16568 116 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 KBTBD12Q3ZCT8 623 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 MARK4Q96L34 752 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 MXRA8Q9BRK3 442 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 CAPN8A6NHC0 703 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 ANPEPP15144 967 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 HNRNPH3P31942 346 aaKnown RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 NSUN2Q08J23 767 aaKnown RBP eCLIP11.19□□□□□ -0.62
EBF3-202ENST00000368648 ALCAMQ13740 583 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 ANO7Q6IWH7 933 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 KLC3Q6P597 504 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.19□□□□□ -0.62
EBF3-202ENST00000368648 GPD1LQ8N335 351 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 OR6P1Q8NGX9 317 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 GABPB2Q8TAK5 448 aaPredicted RBP11.19□□□□□ -0.62
EBF3-202ENST00000368648 CDRT15Q96T59 188 aa11.19□□□□□ -0.62
EBF3-202ENST00000368648 EPAS1Q99814 870 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms