RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ERMNQ8TAM6 284 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 DCAF4Q8WV16 495 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 SREK1Q8WXA9 508 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 MKL1Q969V6 931 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 HEXIM2Q96MH2 286 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 KREMEN1Q96MU8 473 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 CHP1Q99653 195 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 WDR11Q9BZH6 1224 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 DEF6Q9H4E7 631 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 TBC1D17Q9HA65 648 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 SLC38A10Q9HBR0 1119 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 CEP72Q9P209 647 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 FBXL5Q9UKA1 691 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 ADAM21Q9UKJ8 722 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 GUCA1BQ9UMX6 200 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 PTPRQQ9UMZ3 2332 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 DUSP12Q9UNI6 340 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 NR2E1Q9Y466 385 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 ADGRA3Q8IWK6 1321 aa6.97□□□□□ -1.29
ECHDC1-202ENST00000368289 B4DLN1 442 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 PES1O00541 588 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 MPHOSPH10O00566 681 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 ZBTB5O15062 677 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 OPA1O60313 960 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SERPING1P05155 500 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 EEF2P13639 858 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 CASP1P29466 404 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 ACTN2P35609 894 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 CPT1AP50416 773 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SRSF1Q07955 248 aaKnown RBP eCLIP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 ZNF543Q08ER8 600 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 STK4Q13043 487 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 ZNF528Q3MIS6 628 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 MIIPQ5JXC2 388 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 CCNI2Q6ZMN8 369 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 ZC3H3Q8IXZ2 948 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 MFSD4AQ8N468 514 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 OR6J1Q8NGC5 347 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 PIWIL2Q8TC59 973 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 COG1Q8WTW3 980 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 RSAD2Q8WXG1 361 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 STAMQ92783 540 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 DYNLL2Q96FJ2 89 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 CEP95Q96GE4 821 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 MBOAT7Q96N66 472 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 NOX5Q96PH1 765 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 MMTAG2Q9BU76 263 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SH2D4AQ9H788 454 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 METTL14Q9HCE5 456 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 VTA1Q9NP79 307 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 HOMER2Q9NSB8 354 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 PUF60Q9UHX1 559 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SNX12Q9UMY4 172 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHA12Q9UN75 941 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SIK3Q9Y2K2 1263 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 REXO2Q9Y3B8 237 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 HYOU1Q9Y4L1 999 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHA13Q9Y5I0 950 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 SNX11Q9Y5W9 270 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
ECHDC1-202ENST00000368289 C2CD3Q4AC94 2353 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 SETD2Q9BYW2 2564 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 FRMD3A2A2Y4 597 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 GTPBP10A4D1E9 387 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 ASB14A6NK59 587 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 HIDE1A8MVS5 230 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 AKR1B10O60218 316 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 MARCH6O60337 910 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 UBOX5O94941 541 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CBX7O95931 251 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CEACAM5P06731 702 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 MMP3P08254 477 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC172P0C7W6 258 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 IDEP14735 1019 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 RPL13P26373 211 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 TXKP42681 527 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 MAGEA1P43355 309 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 KIF11P52732 1056 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 OXCT1P55809 520 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 ICA1Q05084 483 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 PPFIA1Q13136 1202 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 TDGQ13569 410 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CDC37Q16543 378 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 LPAL2Q16609 132 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 NFIL3Q16649 462 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CFAP221Q4G0U5 840 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 TSSK4Q6SA08 328 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 RUFY4Q6ZNE9 571 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 TMEM179Q6ZVK1 233 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CACNA2D4Q7Z3S7 1137 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 C12orf76Q8N812 135 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 KIAA0895Q8NCT3 520 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 CHST13Q8NET6 341 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 LMBR1Q8WVP7 490 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 ZCCHC14Q8WYQ9 949 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM20AQ96MK3 541 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 PIGSQ96S52 555 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms