RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
VAMP4-202ENST00000367740 IL27RAQ6UWB1 636 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 TMPRSS12Q86WS5 348 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 SCN4BQ8IWT1 228 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 PDCL2Q8N4E4 241 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 SNIP1Q8TAD8 396 aaKnown RBP15.7■□□□□ 0.1
VAMP4-202ENST00000367740 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 MRGPRX1Q96LB2 322 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 MIR1-1HGQ9H1L0 117 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 CFAP97Q9P2B7 532 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 GTF3C4Q9UKN8 822 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 KNL1Q8NG31 2342 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 HNRNPDLO14979 420 aaKnown RBP15.69■□□□□ 0.1
VAMP4-202ENST00000367740 TRIM24O15164 1050 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 CD6P30203 668 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 LIG4P49917 911 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 FOSBP53539 338 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 SMTNP53814 917 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 CLDN6P56747 220 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 USP46P62068 366 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 ZNF174Q15697 407 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 SV2CQ496J9 727 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 BAP1Q92560 729 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 SEMA4CQ9C0C4 833 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 DDX43Q9NXZ2 648 aaKnown RBP15.69■□□□□ 0.1
VAMP4-202ENST00000367740 DPP3Q9NY33 737 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 GMIPQ9P107 970 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 DNM3Q9UQ16 869 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 STARD13Q9Y3M8 1113 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 C2CD2Q9Y426 696 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 RAD54BQ9Y620 910 aa15.69■□□□□ 0.1
VAMP4-202ENST00000367740 A0A0B4J269 797 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 BCAT2O15382 392 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 ZBTB24O43167 697 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 NCAM1P13591 858 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 NCKAP1LP55160 1127 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 CXADRP78310 365 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 TLE3Q04726 772 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 GAD2Q05329 585 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 TAF1BQ53T94 588 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 C6orf118Q5T5N4 469 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 KIAA1324Q6UXG2 1013 aaKnown RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 TOE1Q96GM8 510 aaKnown RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 FUBP3Q96I24 572 aaKnown RBP eCLIP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 GABRG3Q99928 467 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 WSB2Q9NYS7 404 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-202ENST00000367740 TRPM5Q9NZQ8 1165 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 DEC1Q9P2X7 70 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 L1RE1Q9UN81 338 aa15.68■□□□□ 0.1
VAMP4-202ENST00000367740 A0A1B0GVT2 93 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 ZNF840PA6NDX5 716 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 HOXC11O43248 304 aaPredicted RBP15.67■□□□□ 0.1
VAMP4-202ENST00000367740 HCRTO43612 131 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 WISP1O95388 367 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 OAS1P00973 400 aaKnown RBP15.67■□□□□ 0.1
VAMP4-202ENST00000367740 PIGRP01833 764 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 MAGEA11P43364 429 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 ORC2Q13416 577 aaPredicted RBP15.67■□□□□ 0.1
VAMP4-202ENST00000367740 DCAF12L1Q5VU92 463 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 SLC39A4Q6P5W5 647 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 SPATA2LQ8IUW3 424 aaPredicted RBP15.67■□□□□ 0.1
VAMP4-202ENST00000367740 FMNL3Q8IVF7 1028 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 CHPFQ8IZ52 775 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 C1orf216Q8TAB5 229 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 GPR174Q9BXC1 333 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 ASB7Q9H672 318 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 DACH1Q9UI36 760 aa15.67■□□□□ 0.1
VAMP4-202ENST00000367740 B8ZZF3 427 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 GRK6P43250 576 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 MYL7Q01449 175 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 SUZ12Q15022 739 aaKnown RBP15.66■□□□□ 0.1
VAMP4-202ENST00000367740 PREPLQ4J6C6 727 aaPredicted RBP15.66■□□□□ 0.1
VAMP4-202ENST00000367740 BTBD8Q5XKL5 378 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 OSTM1Q86WC4 334 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 IGSF22Q8N9C0 903 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 CADM4Q8NFZ8 388 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 KCNN1Q92952 543 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 SPATA17Q96L03 361 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 TTLL2Q9BWV7 592 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 USP36Q9P275 1121 aaKnown RBP15.66■□□□□ 0.1
VAMP4-202ENST00000367740 TBC1D14Q9P2M4 693 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 KCNG1Q9UIX4 513 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 AK5Q9Y6K8 562 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 SLCO1B1Q9Y6L6 691 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 BOD1L1Q8NFC6 3051 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 USP9XQ93008 2570 aaPredicted RBP15.66■□□□□ 0.1
VAMP4-202ENST00000367740 MYH10P35580 1976 aa15.66■□□□□ 0.1
VAMP4-202ENST00000367740 PP2D1A8MPX8 630 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 KCNJ18B7U540 433 aa15.65■□□□□ 0.1
VAMP4-202ENST00000367740 HNF1BP35680 557 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms