RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 A0A087WXM4 84 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 NPR3P17342 541 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 MKNK1Q9BUB5 465 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 ADGRE3Q9BY15 652 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 A0A1W2PRG6 482 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 SUPT7LO94864 414 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 PRKCBP05771 671 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RBP3P10745 1247 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 GEMP55040 296 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 CSNK2BP67870 215 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 PRKAB2O43741 272 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 CRTAMO95727 393 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RASA1P20936 1047 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 IL5RAQ01344 420 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 PDK2Q15119 407 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 CCDC144BQ3MJ40 725 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 DCAF6Q58WW2 860 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 AP3S1Q92572 193 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 GNG14A0A1W2PPG7 69 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 POU1F1P28069 291 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RFC5P40937 340 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 CASP4P49662 377 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 FUT11Q495W5 492 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 MFSD4BQ5TF39 518 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 CLPBQ9H078 707 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 S100A6P06703 90 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 ERFP50548 548 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 ZSWIM7Q19AV6 140 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 UCMAQ8WVF2 138 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 NCAM2O15394 837 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 FAM20BO75063 409 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 XKR3Q5GH77 459 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 VMP1Q96GC9 406 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 RPS6KL1Q9Y6S9 549 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 TTC37Q6PGP7 1564 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 PSMB9P28065 219 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 WASHC2DQ5SRD0 308 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 VN1R5Q7Z5H4 357 aa12.82□□□□□ -0.36
TPR-201ENST00000367478 GTF3C2Q8WUA4 911 aaPredicted RBP12.82□□□□□ -0.36
TPR-201ENST00000367478 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 RASA2Q15283 850 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 LRRC71Q8N4P6 559 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CPA5Q8WXQ8 436 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 VPS51Q9UID3 782 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 PIN4Q9Y237 131 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 ATP10BO94823 1461 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 TBX3O15119 743 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 TMEM253P0C7T8 217 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 TAF8Q7Z7C8 310 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 NDUFB5O43674 189 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 PTPN4P29074 926 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 TPP2P29144 1249 aaPredicted RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 RPL19P84098 196 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 CCDC157Q569K6 752 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 RNF149Q8NC42 400 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 ZIM3Q96PE6 472 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CDK5RAP1Q96SZ6 601 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 RERGLQ9H628 205 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 TPST1O60507 370 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CCDC80Q76M96 950 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 ADGRF4Q8IZF3 695 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 HPS4Q9NQG7 708 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 ZNF185O15231 689 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 RAD51CO43502 376 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 MGRN1O60291 552 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 RNASEH1O60930 286 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 ZCCHC18P0CG32 403 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 RAB25P57735 213 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 PPIDQ08752 370 aaKnown RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 TOP3AQ13472 1001 aaPredicted RBP12.81□□□□□ -0.36
TPR-201ENST00000367478 ING4Q9UNL4 249 aa12.81□□□□□ -0.36
TPR-201ENST00000367478 COQ6Q9Y2Z9 468 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms