RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ASS1P00966 412 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 FGFR2P21802 821 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PDHA2P29803 388 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ADAM9Q13443 819 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PON2Q15165 354 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ME3Q16798 604 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 EXOC3L4Q17RC7 722 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 GAS2L3Q86XJ1 694 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 APOL2Q9BQE5 337 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NOL6Q9H6R4 1146 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NGRNQ9NPE2 291 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CRYL1Q9Y2S2 319 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TRPV2Q9Y5S1 764 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 H7C1W4 665 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PSMD11O00231 422 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 E2F3O00716 465 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 ADH1CP00326 375 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 NRLP54845 237 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PEX3P56589 373 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 RUNX1T1Q06455 604 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 SLC26A7Q8TE54 656 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 FBXO32Q969P5 355 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 L3MBTL3Q96JM7 780 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 DEPDC7Q96QD5 511 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 GORASP1Q9BQQ3 440 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 FAM192AQ9GZU8 254 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 USP44Q9H0E7 712 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 POLR3FQ9H1D9 316 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 NEK6Q9HC98 313 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 GTF3C4Q9UKN8 822 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PCDHA4Q9UN74 947 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 TRAV19A0A0A6YYK7 116 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PDZK1P1A8MUH7 402 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 HNRNPRO43390 633 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 POLR2EP19388 210 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 FLT3LGP49771 235 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 RGS4P49798 205 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PRAMEP78395 509 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 MESDQ14696 234 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 STAT4Q14765 748 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 GPR135Q8IZ08 494 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 TEX19Q8NA77 164 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 HES6Q96HZ4 224 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CATSPERBQ9H7T0 1116 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 KLHL8Q9P2G9 620 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 XRN1Q8IZH2 1706 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 LRRC72A6NJI9 287 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 MEFVO15553 781 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 GCATO75600 419 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 KRT37O76014 449 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PGM3O95394 542 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 NOS2P35228 1153 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CASRP41180 1078 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CORO7P57737 925 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 TCEA2Q15560 299 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 UGP2Q16851 508 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 PKN3Q6P5Z2 889 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 ACAD11Q709F0 780 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 NRSN1Q8IZ57 195 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 GJA10Q969M2 543 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 SLC4A9Q96Q91 983 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 RHOBTB2Q9BYZ6 727 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 RAD18Q9NS91 495 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 MLXQ9UH92 298 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 NRBP1Q9UHY1 535 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 BLOC1S6Q9UL45 172 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 TRIM33Q9UPN9 1127 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 MORC2Q9Y6X9 1032 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 F5H5T6 163 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 SULT1B1O43704 296 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CXCL14O95715 111 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 THP07101 528 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CD58P19256 250 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 CMA1P23946 247 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 WEE1P30291 646 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 HOXC12P31275 282 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 USP39Q53GS9 565 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 MTSS1LQ765P7 747 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 TSTD1Q8NFU3 115 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 DHTKD1Q96HY7 919 aaPredicted RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 FAM227BQ96M60 508 aa8.93□□□□□ -0.98
SYNE1-206ENST00000367253 HBS1LQ9Y450 684 aaKnown RBP8.93□□□□□ -0.98
SYNE1-206ENST00000367253 M0R3G1 203 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ASGR1P07306 291 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CDC25CP30307 473 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ADCYAP1R1P41586 468 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CCL23P55773 120 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 KIF19Q2TAC6 998 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 TTLL9Q3SXZ7 439 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PRPF18Q99633 342 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 NUSAP1Q9BXS6 441 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PRRG4Q9BZD6 226 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SOHLH2Q9NX45 425 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 HCN3Q9P1Z3 774 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PCDHB5Q9Y5E4 795 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ITIH6Q6UXX5 1313 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms